Actinidia eriantha (wild kiwifruit): 130792089
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Entry
130792089 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar sorting protein 18-like
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04142
Lysosome biogenesis
aew04145
Phagocytosis
aew04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130792089
04142 Lysosome biogenesis
130792089
04148 Efferocytosis
130792089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aew04131
]
130792089
Membrane trafficking [BR:
aew04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130792089
Hops complex
130792089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf_RING_Vps8
zf-RING_Vps41
Nup54_57_C
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_UBOX
TXNDC16_2nd
zf-C3HC4
Beta-prop_VPS8
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
130792089
NCBI-ProteinID:
XP_057509521
LinkDB
All DBs
Position
13
Genome browser
AA seq
988 aa
AA seq
DB search
MEAGRQVFSVDLLERYAAKGRGVITCMAAGNDVILLGTSKGWIIRHDFGVGDSYDIDLSV
GRPGEQSIHRVFVDPGGSHCIATVVGSGGADTFYTHAKWTKPRILSKLKGLVVNAVAWNR
QQITEASTREVILGTDNGQLHEIAVDEKDKKEKHINLLYELKELPEEFTSLQMETATSGN
RTRYYVMAVTPTRLYSFTGIGTLESVFSSYVDSPVRFMELPGEILNSELHFFIKQRRAEH
FAWLSGAGIYHGGLYFGAQQSSTDGDENFVENKGLLDYSKLIEGAEAVKPSSMVVSEFHF
LLLIGNKVKVVNRISEQIIEELQFDQTTESMSRGIIGLCSDASAGLFYAYDQNSIFQVSV
NDEGRDMWKVYLDLKEYAAALANCRDPLQRDQVYLAQAEAAFSAKDFLRAASFYAKINHI
LSFEEITLKFIGINEPDALRTFLLRKLDNLAKDDKCQITMISTWTTELYLDKINRLLLED
DTALENRSSEYHSIIKEFRAFLSDCKDVLDEATTMKLLESYGRVDELVYFASLKKQYEIV
VHHYIQQGEAKKALEVLQKPDVPIDLQYKFAPDLIMLDAYETVESWMTTKNLNPKKLIPA
MMRYSSEPHARNETHEVIKYLEFCVHHLQNEDPGVHNLLLSLYAKQEDDSTLLRFLQCKF
GKGRSNGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVGLALQVDPELAKAEAD
KVEDDEDLRKKLWLMVAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDCGVCQ
KKILTAGWDQRMARGYTLVGAMAPFYVFPCGHAYHAQCLVAHVTRCTNRAQAEYILDMQK
QLTLLGGESRKESSGALTEEDLITSMTPTDKIRSQLDDAIASECPFCSDLMIREISLPFV
LPEEEHEAASWEIKPHNIGSQKSISLAV
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaagctggaaggcaagttttttctgtggatcttctggagagatatgcagctaagggg
cgtggagttattacatgcatggctgctggaaatgatgttattttattaggaacaagtaaa
gggtggatcattagacatgattttggagttggggattcttatgatattgatctctctgtg
ggtcgacctggggagcaatcaatccacagagtctttgttgatcctgggggcagccactgt
attgctactgtagttggtagtggaggtgcagatacattttatacacatgctaagtggact
aagccccgcatcttaagcaaattgaaaggtcttgttgtgaatgccgttgcctggaataga
caacaaataacagaagcttctacaagggaagttattcttggtacagataatggccaactc
catgaaattgcagtagatgagaaggataagaaagagaagcacataaatctgctatatgag
ttgaaagaacttccagaagaattcacaagtttgcagatggagacagctacctctggcaac
agaactagatattatgtgatggccgttactccaacacgactttattccttcactggaatt
ggaacactggagtctgttttttctagttatgttgatagtccagtgcgttttatggagctt
ccgggggaaatactgaacagtgaactgcatttcttcattaagcaaagaagagctgaacac
tttgcgtggctttctggagcaggtatctatcacggtggcctctattttggagcacaacag
agttcaacagatggggatgagaactttgtggagaacaagggccttttggactattcaaaa
ctaattgaaggtgctgaagctgttaaacccagttctatggttgtgtctgaatttcatttt
ctgcttctcattgggaacaaagttaaggttgtcaatagaatcagcgaacaaatcatagag
gagcttcagtttgatcaaacgacagaatcaatgtcaaggggtattattgggttatgcagt
gatgcctctgctggattgttctatgcatatgaccagaactccatctttcaggtgtctgta
aatgatgaaggccgagatatgtggaaggtgtacttggacttgaaggagtatgctgcagcg
ttggcaaattgtcgggatccattgcaaagagatcaagtatatctagcacaggctgaagct
gcattttctgccaaggatttcctcagagcagcctctttctatgcaaagattaatcacata
ttgtcgtttgaagagatcactttgaagttcattggcataaatgaacctgatgctttgaga
acgttcttacttcggaagcttgataatcttgcaaaagatgataagtgccaaataactatg
atttccacgtggacaactgaattatatctggataagatcaatcgtcttctcctcgaagat
gacactgctttagagaatcgtagttcggaataccactcgatcattaaggagttccgtgct
tttcttagcgattgcaaggatgtgttagatgaggcgactaccatgaaactattggaaagt
tatgggagggttgatgaattggtatattttgccagtctgaagaaacagtatgagattgtg
gttcatcattatatccagcaaggagaagcgaagaaagcattggaagtgcttcaaaagcct
gatgtgcccatagatcttcagtacaagtttgcaccagacctcatcatgcttgatgcatat
gaaactgttgagtcatggatgacaacaaaaaacctgaacccaaagaagttgattcctgca
atgatgcgttattcaagtgaacctcatgccaggaatgaaacccatgaagtaataaaatat
ctggagttttgcgtgcaccatttgcaaaatgaagatcctggagttcacaacttgttgctc
tctctgtatgcgaagcaggaggatgatagtacccttcttcgttttctacaatgcaagttt
ggaaaaggacgatctaatggccctgaattcttctatgatcccaaatatgccctgcgcctt
tgccttaaagaaaagcggatgcgggcttgtgttcacatatacagcatgatgtctatgcat
gaagaagcagttggtcttgctttacaggttgacccagaacttgctaaggctgaagctgac
aaggttgaagatgatgaagacttgaggaagaagctctggcttatggtcgccaagcatgtt
gttgaacaagaaaaaggtactaaacgggaaaatattcgaaaggcaatagcgtttctcaaa
gaaactgatgggctgctgaagattgaggatatattgccgttcttcccggactttgccctc
attgatgacttcaaggaagcaatctgctcgtctttggaggattacaacaagcaaattgaa
caactgaaacaggagatgaatgatgcaacacatggtgcagataacattagaaatgatatc
agtgcacttgctcaacgatatgctgtcattgatcgcgatgaggactgtggggtttgccag
aagaaaatcttaactgcaggttgggaccagcggatggctaggggttatacattagtaggt
gcaatggcccctttttatgtcttcccatgtggacatgcctaccatgcacaatgcctggtc
gctcatgtcacaaggtgtacaaaccgagctcaagcagaatatattctggatatgcagaaa
caacttactttattgggaggtgaatccaggaaggagtcaagtggtgccttaaccgaggag
gatttgataactagcatgaccccaaccgataagatacgatctcagttggatgatgctata
gccagtgaatgcccattttgcagtgacttgatgattcgagagatttccttgccttttgtc
ctccccgaggaagaacatgaggctgcttcctgggaaataaaaccacacaacatcggaagc
caaaagagcatttctttagctgtatga
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