Actinidia eriantha (wild kiwifruit): 130792098
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Entry
130792098 CDS
T09464
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130792098
09123 Folding, sorting and degradation
03018 RNA degradation
130792098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130792098
03041 Spliceosome [BR:
aew03041
]
130792098
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130792098
mRNA degradation factors
5'-3' decay
Lsm complex
130792098
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130792098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
130792098
NCBI-ProteinID:
XP_057509531
LinkDB
All DBs
Position
13:19668335..19673897
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AA seq
149 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEESKSRADRKPPGVGRGRGRGREDGTSGRPAKGIGRGMDD
GAKGMGGGRGRGGPGGRTGGNRGSGRGSR
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgctttctctgctcaagaccgctcaaggtcatcctatgttggtggaactgaaa
aatggggagacctataatggacatttggtaaactgtgatacttggatgaacatacatctc
cgtgaagttatctgtacctctaaggatggagataggttttggcgaatgcctgaatgctat
atccggggaaatactattaaatatcttcgagttcctgacgaggtgattgataaagttcag
gaagagagtaagagccgtgcggataggaagccgccgggagtagggcgtggaagaggaaga
ggtcgagaggatggcacaagtgggaggccagcaaaaggcattggccgtggtatggatgat
ggagctaaagggatgggtggaggtcgaggcaggggtgggcctggtggtaggactggtgga
aacagaggtagtgggcgtggcagcagatga
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