Actinidia eriantha (wild kiwifruit): 130792193
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Entry
130792193 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130792193
09122 Translation
03013 Nucleocytoplasmic transport
130792193
03015 mRNA surveillance pathway
130792193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130792193
03041 Spliceosome [BR:
aew03041
]
130792193
03009 Ribosome biogenesis [BR:
aew03009
]
130792193
03012 Translation factors [BR:
aew03012
]
130792193
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130792193
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130792193
mRNA cycle factors
Stress granule specific factors
130792193
Spliceosome [BR:
aew03041
]
Complex C
Other components
EJC/TREX
130792193
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
90S particles
Helicases
130792193
Translation factors [BR:
aew03012
]
Eukaryotic type
Initiation factors
eIF-4
130792193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
MJ0043_C
AAA_22
StrH_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
130792193
NCBI-ProteinID:
XP_057509653
LinkDB
All DBs
Position
13:420472..429896
Genome browser
AA seq
415 aa
AA seq
DB search
MAMMAGGGSVVVPANRAGRRGGVVDEDEKLVFETSKGVEPILSFDEMGIKDDLLRGIYNY
GFEKPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTASREVQVLIVSPTR
ELASQTEKVILAIGNFINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTL
RTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITSKFMTDP
VRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEK
MRSNNFTVSAMHGDMPQKERDAIMAEFRAGETRVLITTDVWARGLDVQQVSLVINYDLPN
NRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggcgggaggcggctcggtggtggttccggcgaacagagcaggtcgtaga
ggaggggtggtagacgaggacgagaagctggtgttcgagacgagtaagggcgtggagccg
atcttgagcttcgacgagatgggcatcaaggacgatctcctcagaggcatctacaactac
ggcttcgagaagccctccgccatccagcagagggccgtcctccccatcatccaaggccgc
gatgtcatcgcccaggcccagtccggaaccggaaagacctccatgatcgccctcactgtc
tgccaggtcgtcgacaccgcctccagagaagtccaagtactgatagtttcacccacaagg
gaactggcatctcagactgagaaagtaattttggctattggcaattttatcaacattcag
gcccatgcatgcattggtggaaaaagtgtgggtgaggatattagaaaactggaatacgga
gttcacgtggtgtctggaactccaggaagagtttgcgacatgatcaagcggagaacatta
cgaactagagctatcaagttattggttcttgacgagtccgacgagatgttgagccggggt
tttaaggaccaaatttatgatgtttacagataccttccacccgagcttcaggttgtttta
atttccgctacccttcctaatgaaattctggagataaccagcaaatttatgacagatcca
gttaggatccttgtgaaacgtgatgagttgactcttgagggcatcaagcagttctttgtt
gcggtagaaagggaggagtggaaattcgatacattatgtgatctctatgataccctcacc
atcacccaggctgttattttctgcaacactaagcggaaggttgactggctaactgagaag
atgcgtagcaataacttcaccgtctccgctatgcatggagatatgccccagaaggagaga
gatgcaataatggccgagttcagggcgggagaaactcgcgttctgatcacaacagatgtt
tgggctcgagggctggatgttcaacaggtttctctggtgataaattatgaccttccaaac
aatcgtgagctttacattcatcgcattggtcggtctggtcgttttggacgcaagggtgtt
gcaataaactttgtcaaaagcgatgacatcaagattctaagagacatagagcagtactac
agtactcagattgatgaaatgccaatgaatgtagctgatttgatataa
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