Actinidia eriantha (wild kiwifruit): 130792652
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Entry
130792652 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130792652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130792652
03036 Chromosome and associated proteins [BR:
aew03036
]
130792652
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130792652
Coactivators
SAGA/TFTC/STAGA complex
130792652
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130792652
STAGA complex
130792652
TFTC complex
130792652
SAGA complex
130792652
SLIK complex
130792652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
LisH_PAC1
WD40_like
Cytochrom_D1
LisH
PALB2_WD40
Beta-prop_VPS8
PROPPIN
Motif
Other DBs
NCBI-GeneID:
130792652
NCBI-ProteinID:
XP_057510171
LinkDB
All DBs
Position
14:complement(2234706..2258241)
Genome browser
AA seq
667 aa
AA seq
DB search
MEEEEIEKAVIAYLKKKGFKQTELAFQEEQQQQHTKTSSSTDPDIAKHILSFSESENVPA
QYHDGYSKLRSWTYSSLDQYKHELLRVLYPVFIHCFMDLVAKGHIQEARAFFNSFREDHE
MMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQYLHKTQSITMLGV
INEHINFQVSPGQPGSISDDAEVVTLVGSGQDAANLINQXEIHWGLLEDSLEERLEKTGS
LLSDLEKVEGETKEGDLDESKKRAVEGGKQGGSLKKSKKDKVAGGTGKAARIEANTVSVA
PRVKPELTLPVMPTEIEHSILEDLRNRVQLSSVALPSVSFYTFVNTHNGLNCSSISYDGS
LVAGGFSDSSLKLWDMAKLGQQTSSSILQGESDSAPSEHVLGTNGRKRSYTLFRGHSGPV
YSASFSPFGDFLLSSSSDSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHD
RTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFI
GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWTIAFSCEGSLL
ASGSADCTVKLWDVTASTKVPKAEEKTGSTSRLRSLKTLPTKSTPVYSLQFSRRNLLFAA
GVLSKGV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagatagagaaggcagtgatagcgtatctgaagaagaagggtttcaag
cagacggagctcgctttccaagaagaacagcaacaacaacacaccaaaacctcctcttcc
acagaccccgacattgccaaacacatcctctctttctccgaatcggaaaatgtgccagca
cagtaccatgatggatacagcaagcttaggtcatggacttatagttcactggatcagtac
aagcatgaattgctccgtgtcctctatccagtattcatccattgtttcatggatcttgtg
gcaaaaggtcatattcaagaagctcgagcgtttttcaatagctttcgcgaagaccacgag
atgatgcacttacgagacctccagaaattggaaggtgttctttctccctctcatctggag
gaaatggagtttgcacattctttgaggcagagcaaagtgaacataaagatatgccagtac
tcttatgagcttctgctgcaatatttacacaagacacagtccattacgatgcttggggtt
attaatgagcatattaactttcaagtttctcctggacagcctggctcaatttctgatgat
gccgaagttgtcaccctcgttgggagtggccaagatgcagctaatctgataaatcagnaa
gaaatacactgggggttgcttgaagactctttagaagaaaggttggagaagacgggaagt
ttgctttcggatttggagaaggtagaaggagaaactaaagaaggcgacttggatgagagc
aagaaaagagcagtggagggagggaagcaaggcggttctctcaaaaaatcaaaaaaagac
aaagtggctggtggaacggggaaagctgctcgtattgaagccaatactgtgtctgtggca
ccacgagtaaaacccgagctaactttgccagtaatgccaacagagatagaacattctatt
cttgaagatctgcgaaaccgtgtacagttaagcagtgtggctctgccctcagtcagcttc
tatacatttgttaacacccataatggcctaaactgttcatcaatctcctacgatggatca
ttggtagctggtggattctcagattcgtcactgaagctttgggacatggcaaagctgggc
caacaaacttccagttctattttgcagggtgagagtgattcagctcccagtgaacatgtg
ctcgggacaaatggcaggaaaagatcttatactttattccggggtcactctggacccgtc
tactcagccagttttagtcctttcggggattttcttctatcatcttcatcagattcaacg
gttcgattgtggagcacaaaattaaatgcaaatctcgtttgttacaagggtcataattac
cctgtgtgggatgttcagtttagtcctgtaggacattatttcgccagtgcttcacatgat
cgaacagcaaggatttggtccatggacagaatacagcctttaagaataatggcggggcac
ttatctgacgtggattgtgtacagtggcatgcaaactgcaattacattgctacaggatct
agtgacaaaacagttcgactgtgggatgtacagagtggggagtgtgttagaattttcatt
ggtcacaggagtatggttttgtctttggcaatgtcgcccgatggtcggtacatggcatct
ggtgatgaagatggcacaattatgatgtgggatctttcaagtggtcgttgtgttacgcct
ttggtgggtcacacgtcctgtgtatggacaattgctttcagttgtgaaggttcacttctt
gcatctgggtctgctgattgcactgtaaaactatgggatgttacagcgagtacaaaggtg
ccaaaagcagaagaaaaaactggaagtacaagcagactcagatcattgaagacactaccc
accaagtctactcctgtctacagtttgcagttttctcgaaggaatcttctgttcgctgct
ggggttctttcaaaaggtgtataa
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