Actinidia eriantha (wild kiwifruit): 130793749
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Entry
130793749 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130793749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130793749
03041 Spliceosome [BR:
aew03041
]
130793749
03036 Chromosome and associated proteins [BR:
aew03036
]
130793749
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130793749
Spliceosome [BR:
aew03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130793749
Complex B
130793749
Complex C
U2 SnRNP specific factors
130793749
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
130793749
TFTC complex
130793749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
130793749
NCBI-ProteinID:
XP_057511575
LinkDB
All DBs
Position
2:4588485..4596301
Genome browser
AA seq
1212 aa
AA seq
DB search
MYLYNLTLQQATGIVCAIYGNFSGGKTQEIAVARGKVLDLLRPDDNGKIQTLLSVDIFGA
IRSLAQFRLTGAQKDYIVIGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTISYSVCGVDCGFDNPM
FAAIELDYSEADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSDQVDNGANMLVTVPGG
GDGPSGVLVCAEXFVIYKNQGHPDVRAVIPRRGDLPAERGVLIVSAAVHKQKSMFFFLLQ
TEYGDVFKVTLDHDNDRVKELKIKYFDTIPVTSALCVLKSGFLFAASEFGNHALYQFQAI
GDEPDVESSSATLMETDEGFQPIYFQPRRLKNLVRIDQVESLMPIMDMKVVNLFDEEAPQ
VFSLCGRGPRSSLRILRPGLGISEMAVSQLPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASIGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVVVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYESLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVLQPKRKLLVIIESDQGAFTAEEREAYKKECFDDAGMGENGKVEQMENGGDDEDKED
PLSDEQFGYPKAESGKWVSCIRVLDPRTANTTCLLELLDNEAAFSICMVNFHDKEYGTLL
AVGTAKGLQFLPKRSLAAGYIHIYRFLEDGKSLELLHKTQVDGVPLALCQFQGRLLAGIG
PMLRLYDLGKRRLLRKCENKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIF
ADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG
APNKMEEIVQFHVGDVVTCMQKASLIPSGGECLIYGTVMGSLGALLAFTSRDDVDFFSHL
EMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEI
LKKLEEVRNKII
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacaatctcactctgcaacaagccaccggcatagtctgcgccatctatggc
aacttctccggcggaaaaacccaagaaattgctgtcgccagaggcaaagtcctcgatctc
ctccgacccgacgacaacggtaagatccaaaccctcctctctgttgatattttcggtgca
attaggtctttagctcaatttaggttaactggtgcccaaaaggactacatagtaattggg
tccgattcgggtcgaatcgtgatcctagaatacaacaaggagaagaatgtgttcgacaaa
gttcaccaggaaacgtttgggaaatcgggttgtcgccggattgttccggggcagtacttg
gcggtagaccccaagggtcgggccgtgatgatcggtgcttgtgagaagcagaagctagtt
tatgtgttgaatagggataccgcggctaggctgaccatttcgtcgcctttagaggcgcat
aaatcacacacgattagttattcagtgtgtggggttgattgtgggtttgataacccaatg
tttgccgcgattgagttggattactcggaggcagatcaggattcgactgggcaggctgca
gccgaagcccagaagcacttgaccttttacgagcttgatcttgggcttaatcatgtttcg
aggaaatggtctgatcaggttgataatggtgctaatatgcttgtgactgtaccgggtggt
ggggatgggccgagtggtgtgcttgtgtgtgcggagnaatttgtgatatataagaatcaa
ggtcacccggatgtacgtgctgtcattcctaggcggggggatttaccggccgagcgtggg
gttcttatagtttcggctgctgtgcacaagcagaagtctatgttcttctttcttttgcaa
accgagtatggagatgtgttcaaagttacgttggatcacgacaatgaccgtgtcaaggag
ttgaagattaagtatttcgatacgattcccgtgacgtctgccttgtgcgtcttgaaatcg
gggtttctgtttgctgcttcggagtttgggaatcatgctttatatcagtttcaggctatt
ggggacgagcctgatgtggagtcttcatcagctaccttaatggaaacagacgaaggcttc
cagcctatatatttccagcctagaagacttaagaatcttgttaggatagaccaggttgag
agcttgatgccaattatggacatgaaagtcgtaaatctttttgacgaagaagctcctcaa
gttttttcactttgtgggaggggtcctcggtcatctctaaggatactaagaccgggtttg
ggcataagtgaaatggctgtctcacagcttcctggagtcccaagtgctgtctggacagtg
aagaaaaacataaatgatgaatttgatgcttacattgtcgtttcatttgcaaatgcaact
cttgtcctttcgattggtgagacggttgaagaagttagtgatagtggattccttgatacg
accccttcacttgctgtttcactgataggcgatgattcactaatgcaagttcatccgagt
ggtattaggcatataagggaagatgggcgtattaatgagtggagaactcctggaaagagg
acgattgttaaggtcggatctaatagacttcaagtggttattgcactgagtggaggagag
cttatatactttgaggtggatatgactggccagttgatggaggttgagaagcatgaaatg
tctggggatgtagcttgtttggacattgcccctgttcctgaaggacgtcaaagatctcgt
ttccttgcagttggatcatatgacaactgcatccgtatcttatctttggatcctgacgac
tgtatgcaggttttaagtctgcaaagtgtctcttcacctccagaatctcttctctttctt
gaagtccaggcatctatcggtggggaggatggtgcagatcaccctgctagcctttttctc
aatgctggcttacagaacggggttttgttcagaacagtggtagacatggtgacaggtcaa
ctttcggatgcccgttccagattcttaggactgagagccccgaagctcttttctgtggtt
gtaagagggcggcgtgctatgctttgcctgtcaagtagaccctggttgggttacattcat
caaggtcatttccttctaacacccctttcatatgagtctcttgaatatgcggcatcattt
tcatctgaccagtgtgcggaaggtgtagttgctgttgctggggatgcattaagggttttt
actattgagagattgggggaaacatttaatgaaactgcgattcctttgaggtacacacca
aggaagtttgtgctccaaccaaagaggaaacttttggttattattgagagtgatcaaggg
gcattcacagcagaagaacgtgaagcttataaaaaggagtgctttgatgatgctggaatg
ggggaaaatggcaaggtggaacagatggagaatggcggtgatgatgaggataaggaggat
cccctttctgatgagcagttcggttacccaaaggcagagtcgggaaagtgggtttcttgc
atcagagttcttgacccaaggacagcaaacactacttgtttgcttgaacttctggacaat
gaggctgctttcagcatttgcatggtaaatttccatgacaaagaatatggaactctttta
gcagttggtactgcaaagggcctgcaatttttgcccaaaagatctcttgctgccgggtat
attcatatttataggtttttggaagatgggaaatcccttgagcttttgcacaagacacaa
gtggatggtgttcctcttgctttgtgccagttccagggaagattacttgctggaatagga
cctatgctcagattgtatgatttggggaaaaggaggttgcttaggaagtgtgagaataag
ctgttccccaacacaatcacctcgattcatacctatcgtgatcgtatctacgtgggtgac
attcaggagtcattccactattgcaagtacagacgtgatgaaaatcagttatatatattt
gctgatgattctgttccaagatggcttactgcatcataccacgtggattttgacaccatg
gctggtgcagacaagtttggaaatatctattttgtgcggttaccacaggatgtgtcagat
gagatcgaagaagatccaactggtgggaagataaagtgggagcaggggaagctgaatgga
gcccctaacaagatggaggaaatagtgcagttccatgttggtgatgtggtcacatgcatg
caaaaggcatctctaattccaagtggtggagaatgtctcatttatgggactgtaatgggg
agtttgggtgcattacttgctttcacttctcgagacgatgtggacttcttttctcatttg
gagatgcatatgaggcaggaacacccgcctttgtgcggaagagatcatatggcctataga
tctgcctattttcctgttaaggatgtgattgatggagatctgtgtgagcagtttccaaca
ttgccaatggatttgcaacggaaaattgcagatgaattggatagaactccaggagagata
ctgaagaaacttgaagaagttcgaaataaaatcatttga
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integrated database retrieval system
