Actinidia eriantha (wild kiwifruit): 130793988
Help
Entry
130793988 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130793988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130793988
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130793988
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
HECT type E3
130793988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
HEAT_2
ARM_ARMC5
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
130793988
NCBI-ProteinID:
XP_057511852
LinkDB
All DBs
Position
14:20226539..20245291
Genome browser
AA seq
1890 aa
AA seq
DB search
METRSRKRAEATSSAPSSSSLSSGPTTRSSKRARLSVAATATNPAAASSIATRSRATRSQ
DSLASSTPMDSTNEPSGSGTRGRRGKNQSSDKDDKGKEKEHEVRVRDREREPERGLGLNI
DGGGDEDDNDNEGGVGLLHQNLTTASSALQGLLRKLGAGLDDLLPSSAMGSSSQQSGRLK
KILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIML
LAARALTHLCDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKISQEHPTAC
LRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAK
VLEHASVCLTRIAEAFATSPDKLDELCNHGLVTQAASLISTSNSGGGQASLSTPTYTGLI
RLLSTCASGSPLGAKTLLLLGISGILKDILSGSGLVASISVSPALSRPPEQISEIVTLAN
ELLPPLPQGTISLPASTNLFVKGSLSKSPVSSSGKQEDTNGSATEVSAREKLLNDQPELL
QQFGMDLLPVLIQIYGSSVNGSVRHKCLSVIGKLMYFGSADMIQTLISATNISSFLAGVL
AWKDPQVLVPALQIAEILMEKLPGTFSKMFVREGVVHAVDGLILPESSNTAPSQPLSNEK
DNDSIPGTSSRRRHRRRGVNSNTDLHTTEDSKNPIPVVGSPPSSIEVPASNSSLRKSISA
HAKVFKDKHFPSEPGVTEVGVTDDLIHLKNLCMKLTAGFDDQKTKSKGKSKVSGFRFVDF
PASKEENLVGVISEMLAELSKGEGVSTFEFIGSGVVAALLNYFSCGYFSKERISEANLPK
LRQQAIRRYKAFIAVALPYTVDEGNVAPMSILVQKLQNALSSVERFPVVLSHAPRSSSGN
VRPSSGLSALSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAVEDFLWPRVQRSEPA
QKPSASTGNSESGTTPAGAAASSPSTSTPSSNTRRHSTRSRSSVNIGDATKKELSQEKND
SSSKGKGKAVLKAAQEAREPQTRNARRRAALNKDAQMKPVNGDSSSEDEELDISPVEIDD
ALVIEDDDISDDDDDDHDDVLRDDSLPVCMPERVHDVKLGDSAEDSPAATATSDGHTNPA
SGPSSRAATVKGSDSTEFRSGNSIGSRGAMSFAAAAMAGLASANGRGIRGGRDRHGRPLF
GSNDPPRLMFSAGGKQLNRHLTIYQAIQRQPVLDEDDEERYPGNDFVSSDGSRLWGDVYT
ITYQRADSQTDRGSVGALNSITSSKPTKAGSTSNSNVESSLQQTSLLDSILQGELPCDLE
KSNSTYNILALLRVLEGLSQLAPRLRVQAVTDSFAEGKILSLDELSASGVRVSSEEFINS
KLTPKLARQIQDALALCSGSVPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQ
MQQGVDGQGSSNDREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVG
TGLGPTLEFYTLLSHDLQKAGLKMWRSNSSSDKTSMEVDGDEQKNGKFSNVTVLGSAGDS
DLVQAPLGLFPRPWPYNADASNGSQFSKVVEYFRLVGRVMAKALQDGRLLDLPMSTAFYK
IVLGQELDLHDFLSFDAELGRTLQELQAIVRRKKYMESVGGHSCEEVADLRFRGARIEDL
CLDFTLPGYPDYTLKPGEENVDINNLEEYISLVVDATVKTGITRQMEAFRTGFNQVFDIS
TLQIFSPHELDYLLCGRRELWEAETLVDHIKFDHGYTAKSLAIVNLLEIMGEFTPEQQRA
FCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTTGNTVANGTGLSESADDDLPSVMTCANY
LKLPPYSTKEIMFKKLLYAISEGQGSFDLS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccgcaagcgggcggaggctacctcatcagccccttcttcttcttct
ttatcttccggtcccaccactcgatccagcaagcgagctcgtctctccgtcgccgccaca
gccactaatcccgccgccgcttcatcgatcgccactcgttcccgcgcaactcggtcccaa
gactcacttgcctcgtctactccgatggattccaccaacgagccgtccgggtccggcact
cgtggccgacggggaaagaatcagagttcggataaggacgataaggggaaggagaaagag
catgaagttagggttagggatagagaaagggagcctgagagaggcttagggttgaacatt
gacggtggtggagatgaggatgataacgacaacgaaggcggtgttgggcttctccaccag
aatttgactactgccagcagtgcgcttcaagggcttcttcggaaattgggggcgggattg
gacgatttgctgccgtcgtcagcgatggggtcgtcctcgcagcagagcgggcggctgaag
aagatcttatctgggttaagggccgacggagaggaagggaaacaagtcgaggctttgacg
cagctttgcgagatgttgtcgatcggtactgaggagtcgcttagtactttctcggtggat
tcgtttgttccggtgctcgtgggtctgcttaaccatgagagcaatcccgatatcatgctt
cttgcggcaagagctctgactcatctgtgtgatgtgcttccttcttcgtgtgctgcggtt
gtgcactacggtgcagtttcgtgctttgttgctcggctgctgactattgagtacatggat
ttggctgaacagtctcttcaagcactgaagaagatttctcaggaacacccaactgcttgt
ttgagagcaggtgcactcatggcagtgctttcttatctcgacttcttctccacgggagta
cagcgagtggctttatctactgcggcaaatatgtgcaagaaactcccttctgatgcagct
gactttgtaatggaagctgttcctttgttgacaaaccttcttcagtatcatgatgcaaag
gtgctggagcatgcttctgtctgcttgactcgaattgctgaagcatttgcaacatctccg
gataagctggacgaattatgtaatcatggcctggttacacaagctgcctcactcatttcg
acaagcaattctggaggtggtcaggcatctcttagcacacctacgtacacaggcttaatc
cgactgctttccacatgtgcaagtgggtctcctctaggagccaaaactttgctactcctt
ggcatcagtggtattcttaaggatatactatcgggttctggtcttgttgctagcatttct
gtttcgcccgcgttaagtagaccgccagaacagatttctgagattgtgactcttgcgaat
gaactacttcccccgctgccccaagggaccatttctcttccagccagcactaatctattt
gttaaaggatctctttcaaagtctcctgtcagcagttctggcaaacaagaagatacaaat
ggaagtgcaactgaggtttcagcccgcgagaagttactaaatgatcagcctgagcttctg
cagcaatttggaatggaccttcttccagtactaattcagatatatggatccagcgtgaat
ggttctgtgcggcacaagtgtctttcagttattggaaaattgatgtacttcggcagtgca
gatatgatccagactctaataagtgctacaaacatatcgagtttcttagctggggttttg
gcgtggaaagatccccaagtcttggttcctgcccttcaaatagccgagattctaatggaa
aaactgccagggactttctccaagatgtttgtgagagaaggtgtggttcatgctgtagat
ggtcttattttacctgagtcttccaatactgctccttctcaaccattgtccaatgagaaa
gataatgattctatacctggaacatcgtcacgtagacggcatcggcggcgtggtgtcaat
tcaaatacagatttgcacactaccgaagattcaaagaacccaattccagttgttggttct
cctcctagctccatagaagttcctgccagcaactctagtcttcgtaagtcaatcagtgct
catgccaaagttttcaaagataaacacttcccttcagagcctggggtcaccgaagttgga
gttacagatgatcttatacatttaaagaatctctgcatgaagttgaccgctggttttgat
gaccagaaaactaaatcaaaagggaagtctaaagtttctgggtttcgctttgttgatttt
cctgctagtaaagaggagaacttagttggggtcatatctgagatgcttgcagaactaagc
aagggggaaggtgtgtccacttttgagttcattgggagtggagttgtggcagctttattg
aattacttttcttgtggatacttctccaaggaaagaatttctgaagctaaccttcccaag
cttcgccaacaggcaatcagaagatacaaggctttcattgcagttgctctcccctacact
gttgatgaaggtaatgtggctccaatgagtatcttggttcagaagcttcaaaatgctttg
tcctccgtagagcgctttcctgttgtgttaagccatgctcctcgatcatcgagtggcaat
gtacgtccctcttcaggtttgagtgcattgtcccagccatttaagttgcgtctatgtaga
gctcaaggagaaaaatcactccgtgattattcttccaatattgtattaattgatccatta
gcaagtttagcggctgtagaagacttcctttggccaagagtccaaagaagtgagcctgcg
cagaagccctcagcctccacagggaattctgagtctgggactacgcctgctggagctgct
gcttcatcaccatctacttctactccttcttccaacactcgtcgccattctactagatcc
agatcatctgttaatattggagatgcaaccaaaaaggaattgtcacaagagaaaaatgat
agctcatcaaaggggaagggtaaggctgttttgaaagctgctcaggaggcaagggaacct
caaactagaaatgcccgtagaagagcagccttgaataaagatgctcaaatgaagcctgta
aatggagactcaagttctgaggatgaggagctggatatatcacctgttgagattgacgac
gcgctggtgattgaagatgatgatatttcggatgacgatgatgatgaccatgatgatgta
ctgagagatgattctcttcctgtttgcatgccagagagggtacatgatgttaaattgggt
gattcagctgaggacagtcctgctgccactgcaacaagtgatggccataccaacccagct
tctggtcctagtagcagagctgctacagttaagggctcggattctactgagtttaggagt
gggaactccattggttcaaggggtgcgatgtcctttgctgctgctgccatggctgggctt
gcatctgcaaatggtagaggtatcaggggaggcagagatcggcatggccgccctctattt
ggttctaatgatcctcctagactaatgttttctgcaggtggaaagcagcttaacaggcac
ttgactatctatcaggctatccaacgccagcctgtgctagatgaggatgatgaggagagg
tatcctggaaatgattttgtatctagtgatggaagtagattgtggggtgatgtttatacc
ataacgtatcaaagggcagacagccagactgataggggttcagttggagcattgaattct
ataacttcctctaaacctaccaaggcggggtccacatcaaattctaatgttgaatcttca
ttgcagcaaacgtcacttcttgatagcattttgcagggagagctgccttgtgatctggaa
aaaagtaattctacttataatatattagcgctgttgcgtgtgttagagggtttgagtcag
cttgcacccaggttgagagttcaggcagtgactgacagttttgctgaagggaagattttg
agtctggacgagcttagtgccagcggtgtcagggtttcttccgaagaatttattaacagt
aagctcactcccaaattggctcgacaaatccaggatgcccttgcactttgtagtgggagt
gtaccatcctggtgttaccaactgacgaaagcgtgtccattcttgtttcctttcgagact
aggcgacaatacttctattctactgcttttggactgtcacgggcattatataggcttcag
atgcagcagggtgtggatggtcaaggatcaagtaatgacagagaggttagagttggaagg
ttgcaacgccagaaagtgcgtgtctcgcgtaatcgcattctggattccgctgcaaaagtg
atggagatgtattcaagccaaaaggctgttcttgaagtagaatactttggtgaagttggc
actggattgggtcctactttggagttctacacccttctgagtcatgatttacaaaaagct
ggacttaaaatgtggaggtcaaattcttcgtctgacaaaacttctatggaagttgatgga
gatgaacaaaaaaatgggaagttcagtaatgtcactgtcctgggatcagctggtgatagt
gatcttgtccaagctcctcttggattgttccctcgtccttggccatacaatgcagatgct
tctaatggaagccaattttccaaagttgtcgagtatttccggctggttgggcgtgtgatg
gccaaagctcttcaagatgggcgacttttggacctgccaatgtcaacagcattttataag
atcgtgcttggtcaggagcttgatttgcatgattttctttcttttgatgctgaacttggg
aggactttacaagaattgcaagctattgttcgccggaaaaaatatatggaatcagtgggt
ggtcacagttgtgaagaagttgctgatttacgttttcgtggcgctcgaatcgaagatctc
tgtttggatttcaccctccctggctatccagattacactttgaaaccaggcgaagagaat
gtggatatcaacaacttggaggagtacatatccttagtagttgatgctactgtcaagact
ggaattacgaggcaaatggaagcgtttagaactgggtttaatcaagtttttgacatctcg
actttgcaaatattttctcctcatgaattggactatctgctttgtggccgtcgagagctg
tgggaggctgagacactcgtagatcacataaaatttgatcatggatacacagctaagagc
cttgccattgttaatttgctggagattatgggagaattcaccccagagcaacagcgagct
ttttgtcagtttgttactggtgcgcctcggctcccacctggtggtctggcagtgctgaac
ccaaaattgacaattgtgaggaagctttcttcaacaactggtaatacggtggccaatgga
accggattgtcagaatctgcagatgatgatttgccaagtgtgatgacttgcgctaattac
ctcaagcttcctccttactctaccaaggaaattatgttcaagaagctactgtacgcaatt
agtgaagggcagggatctttcgatttgtcataa
DBGET
integrated database retrieval system
