Actinidia eriantha (wild kiwifruit): 130794985
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Entry
130794985 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130794985
03460 Fanconi anemia pathway
130794985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130794985
03036 Chromosome and associated proteins [BR:
aew03036
]
130794985
03400 DNA repair and recombination proteins [BR:
aew03400
]
130794985
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130794985
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130794985
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130794985
FA (Fanconi anemia) pathway
Downstream FA components
130794985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
130794985
NCBI-ProteinID:
XP_057512922
LinkDB
All DBs
Position
2:complement(6616391..6625957)
Genome browser
AA seq
1108 aa
AA seq
DB search
MSTWQIFSDADNNFRWELSDQQLHIEPKDDEPGGAPLLPSMADLLLQGCSELMENGEGRF
QSPPMFRSGLGKSVAVKQSSLAKALSIIGDEDDAFVDTCQMFNGHENGFSFSNSMFQTGS
GKKVNISSTGLVRAKTLLGLEENYDRHPSPGVEYSKNQSTSFVWQNSSQLKTLEGVNNIC
KDATTVPMPSFNFKTGLLGDDSNRKAIPDLINSATKCPPIKFNTAGGRSISVSSDALQRA
KSLLGDLVLGTLFNEGDVNNAAFLFSKQGSENHCNNKNSPFSTPYHQEIAKTKHVSKSFT
SPLRSDYSRMQSSVMSDNVSLRSNLIKKFDAEDFNNSCKMSNNTLCQQKTPSCRPLSHLE
MDNSLPDGVSSRISLRGSSLGGPLVDISNKIGMSRTDIKLTTGEKRRLGRSSISSFKRPR
SSRFITPLNKMLSAPTGLSTLAPEESCCRRRVSTQYPFQVPRVSAKEYFGAPSSNLNMLN
QLPHHIRTMSPENAEKYMFDGGSGVKSIGAETFYHMLAQSGASVQYFSKEWIINHYKWIV
WKLACYERCYPAKSFGKLLTVSNVLDELKYRYEREVNHGHRSAIKRILEGDQPPTSMLVL
CISSIHLNCDTTVETLPMASDAADNGTATKVELTDGWYSINALLDVLLLKKLATGKLFVG
QKLRIWGAGLRGWVGPVSPLQVSSTVSLLLHINGTYRAHWADRLGLCKGGSAPLAFRCIK
SMGGPIPCTLVGVTRIYPVLYRERLCNGEFVVRSERMEAKMIQLYNQRCSAIAEGIMSEF
QRGIEQRHADNDNDSEEGAKILKILETAAEPEVLMAEMTSEQLTSFTTYQAKLEAIRQSD
MQKSIDKSLEDAGLSAREVTRFMRVRVVGLTHKNYLTKCCPRKGLITIWNPTEKQQLELV
EGKAYNVSGLIPLSSESDTLYLKARGSTSKWVPLSLSATEHFESFFTPRKSVLLSHLGEV
PLSSEFDIAALVVYVGEVYTDAHQKKQWVFVTDGSISVSHLEEPSNSLLAISFCSPYIDG
DSFAPINDNLVGSAVGFCNLIKRAKDQVNHLWVAEATENSTYFLSYDTXYCCHLKEAAAS
AEKWAKISTLTIEKLRRKVLSIIDNDEG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatcttctccgacgccgacaacaacttccggtgggagctatccgac
caacagctccacatcgaaccaaaggatgacgaaccaggcggcgctcctcttctcccttcc
atggccgatctcttgcttcaaggatgttcggagctaatggagaatggcgaaggtcgtttt
cagagccctccaatgttccgaagcggattggggaaatcagttgcagtgaagcaatcttcc
ttggcgaaagctttatctattattggcgatgaagacgatgcttttgttgatacatgtcaa
atgtttaatggacacgaaaatggattcagtttctccaattcaatgttccagacaggctcg
ggcaaaaaggttaacatatcttccactggtcttgtcagagccaagacattgttgggattg
gaagaaaattatgatcgtcatccttctccgggtgttgagtattcaaagaatcagtcaacc
tcctttgtttggcaaaattcatctcaattaaagacactagagggagtcaataatatttgt
aaggatgctacaacagttccaatgccttcgttcaattttaagacaggtttgttaggagat
gattcaaacagaaaggccattccagatcttataaattctgctactaagtgcccaccaatt
aagttcaatactgccggtgggagatccatatcagtttcaagtgatgcattgcagcgcgca
aagagcctccttggtgacctggttctaggaactttatttaacgaaggggatgtgaataat
gcagctttcttgttttccaaacaaggaagtgagaatcattgcaacaacaaaaatagccca
ttttctactccttaccatcaagaaatagcaaagaccaaacatgtatcaaagagttttaca
tcccctctgcgttcagattatagccgaatgcaatcatctgtgatgtcagataatgtaagt
ttgaggagtaacttgatcaagaaatttgatgcagaggacttcaacaacagttgtaagatg
tctaataatacactttgtcagcaaaaaacaccaagctgtaggcctttgtcacacctagaa
atggacaattctttgccagatggtgtcagttcaagaattagtctgcgaggaagttcattg
ggtgggccactagtagatatttcaaataaaattggaatgtcacgtacagatatcaaacta
actactggtgaaaagaggagacttggaaggagttctatctcttcattcaagaggccccgc
agttccagattcatcacccctctgaataaaatgttgtctgctcctactgggctatccact
ttagcacctgaagaatcctgttgcagaagaagggtttccactcaatatccttttcaggtt
ccacgagtatctgcgaaggaatattttggagcaccttcatccaacctgaacatgttgaat
caattgccacaccatataagaacgatgagtccagaaaatgcagaaaagtacatgttcgat
ggtggatctggtgtaaaatccataggagcagaaactttctaccacatgttggctcagtct
ggagcttctgtacaatatttttctaaagagtggattataaatcattacaagtggattgtt
tggaaacttgcatgttatgagaggtgctatcccgctaaatcttttggcaagctgttgaca
gtttctaacgtgcttgacgaattaaaatatagatatgagagggaagtaaatcatggtcat
cgttctgcaattaaaagaattctggaaggagatcaaccacctacttcaatgttggtactg
tgcatttcatctattcatttaaattgcgacacgacggtggagactctgcctatggcatca
gatgctgctgacaatgggactgctacaaaagtagaattaactgatggctggtactcaatc
aatgctttattagatgtactgctattgaagaagctggctactgggaaactgtttgtggga
cagaaacttaggatctggggagctggattgcgtggctgggttgggcctgtttcgcctctt
caggtatcaagcacagttagtcttctgctgcacattaatgggacatatagagctcattgg
gctgatcgtttggggttatgtaagggtggcagtgctccgttagcatttagatgcatcaag
agtatggggggtccaattccttgcacgttagttggagtcacacgaatataccctgttctc
tacagggaaaggttatgtaatggggaatttgttgtgagatcagagaggatggaagctaaa
atgatacaattatacaaccagaggtgctctgctattgcagagggcattatgtctgagttt
caaaggggaatcgaacaacgtcatgctgacaatgacaatgatagtgaagaaggggcgaaa
atcctaaagatactagagactgctgcagaacctgaagtgctaatggcagagatgacttca
gagcaactgacttcttttactacttatcaagcaaaacttgaagcaattcggcagtcagat
atgcagaaatcaattgacaaatctctggaagatgctggtctaagtgcaagagaggtcacc
cgatttatgagggtgagggtggtcgggttaactcataaaaactatctaacaaagtgctgc
cctaggaaaggcttaataacaatatggaacccgactgagaagcagcaattagagctggtt
gagggtaaagcatataatgtttccgggcttataccattaagctccgagtctgataccctt
tacttgaaagcaagaggatctacaagtaaatgggtgcctttgtctctctcagcaactgaa
cattttgagtcattcttcactcctcgtaaatcagttctgttgtcacatttgggtgaggtt
cctctctcgagtgaatttgatatcgctgcattggtcgtgtacgtgggggaggtatataca
gatgctcatcaaaagaagcagtgggtgtttgtgacagatggctcaatatcagtgtcacat
ttggaagagccatcaaattctttgcttgccatcagcttctgttcaccatacattgacggt
gactcatttgcaccgatcaacgataatcttgttggatcagcagttggcttctgtaatctc
ataaaaagagcaaaggaccaagttaatcatctatgggtggcagaagcaaccgaaaattcg
acctattttttgagttatgatacantgtattgttgtcacttgaaagaagctgctgcttct
gctgaaaaatgggcaaagatctctaccttgacaattgagaagcttagacggaaggttttg
tctatcattgataatgatgaaggctaa
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