KEGG   Actinidia eriantha (wild kiwifruit): 130795167
Entry
130795167         CDS       T09464                                 
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 21 homolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    130795167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aew03009]
    130795167
Ribosome biogenesis [BR:aew03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    130795167
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st EIF3I WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 PEP5_VPS11_N NBCH_WD40 WD40_like Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_LRRK2 VPS8_N Utp12 Beta-prop_IP5PC_F DALR_1
Other DBs
NCBI-GeneID: 130795167
NCBI-ProteinID: XP_057513129
LinkDB
Position
15:12767988..12788047
AA seq 910 aa
MGIFEPFRAIGYITSSVPFSVQRLGTEXFVTVSVGKSWQIYNCAKLNLVLVGPQLPKKIR
ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHTAKVNLLLLFGEHVSSVDVDGNILIWSF
KGIDQNHAPIGHVLLEDKFSPTCIMHPDTYLNKVILGSQEGSLELWNISTKKKLYEFKGW
QSSICSCISSPALDVVAIGCADGKIHVHNIRYDEEVVTFTHSSRGSVTALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLHSVIGEAHDSPIISLHFFANEPVLMSSSADNSVKMWIFDTS
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHISKR
AKKLRVKEEEIKLKPVIAFDVAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILKPC
PEKPTPVKACAISACGNFAVLGTAGGWIERFNLQSGISRGSYMDSSERNSCAHGGEVVGV
ACDSTNTLMISAGYHGDIKVWEFKGRELKSRWEIGCSLVKIVYHRSNGLLATVADDLIIR
LYDVVALRMVRKFEGHTDRVTDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDALYVDVS
ITALSLSPNMDVLATTHVDQNGVYLWVNQAMFTGASNVESYGSGKEIVSVKLPSVSSIER
SEDNDSDKPIVIHSKVAISSHTPLSDKQIPDLVTLSLLPKSQWQSLINLDIIKARNKPIE
PPRKPEKAPFFLPSVPSLSGEIIFKPTESADEEKDKKADKLEESRKQADLALPLPHFVQL
LHAAADMKNFSAFTDYIKSLSSSTLDMELRMLQIIDDDDDQEPEKRPEFHSVELLLDYLI
HEITCRNNFEFIQAVIRLFLKIHGETIRRQPKLQDKARKLLEIQGAVWQRVDRLFQGARC
MVTFLSNSQF
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgggaatattcgaaccatttcgagcaatcgggtacatcacaagcagtgttccgttctct
gttcagagattgggcaccgagnacttcgtcaccgtcagcgtcggcaagtcttggcagatt
tataactgtgccaagctcaatttggtgcttgttggtcctcaactgccgaagaagatacga
gctcttgcttcctatcgtgactacacatttgctgcatacgggaatgacattgcagttttt
aagcgtgctcatcaggtggcaacttggagcaggcatactgcaaaagtcaacctattgctt
ttgtttggagagcacgtctcaagtgttgatgtcgatggcaatattttaatttggtctttt
aaaggaattgatcagaatcatgctccgattggacatgttttactggaagacaaattcagt
cctacctgtataatgcatccagatacttacctaaacaaggtaattcttgggagtcaagaa
ggttcattggaactttggaacattagcacgaagaaaaaactttatgagttcaagggctgg
cagtcatccatatgttcttgtatctcatcaccagcactggatgttgttgcaattggttgt
gctgatggaaagattcatgtacacaatattcgttatgatgaagaggtagttacattcaca
cattcttctcgagggtctgtaactgccttatctttcagcactgatggtcagccactctta
gcatctggtggttcatctggtgtcataagcatatggaatcttgagaagaggcggctccac
tctgtcattggcgaggctcatgatagtccaataatttcactgcacttttttgcaaatgag
cctgtactgatgagttcatctgcagacaattccgtaaaaatgtggatatttgacacaagt
gacggggatcctcgtctgttacgctttcgaagtgggcatagtgctcctcctctttgcata
aggttctatgctaatggcagacatattctgtcagctggccaagatcgtgcctttcgtctc
ttctctgtcattcaggatcagcaaagcagggagctttctcagcgtcatatatccaaaaga
gcaaaaaaactcagggtcaaggaggaggagattaaactgaagcctgttattgcatttgat
gttgctgaaataagggagcgtgattggtgcaatgtggttacatgccatatggatactgca
caggcatacgtatggaggcttcaaaattttgttcttggtgaacacatcctaaaaccgtgt
cctgaaaagccaacaccagttaaggcctgcgccatcagtgcctgtggaaattttgctgta
ttaggtacagctggtggttggattgagagatttaatcttcaatcaggcatcagccgaggc
agttacatggattcgtcagaaagaaatagctgtgcacatggtggagaggtggttggtgtt
gcctgtgattcaacaaacaccttaatgataagtgcaggatatcatggggatataaaggtg
tgggaattcaagggtcgagagctaaaatccagatgggagattggttgttcgctggtgaag
attgtttatcatcggtccaatggtcttctagcaacagtggcggatgatttaatcattcgt
ttatatgatgttgtggcactaagaatggttcggaagtttgaaggccatacagaccgtgtg
acagacttctgcttcagtgaggatggcaaatggcttttgtcatctggcatggatgggagt
cttagaatttgggatgtcatcttagcaaggcaaatagatgctctgtatgttgatgtttca
ataactgcattgtctttgtccccaaacatggatgttttagcaacaactcatgttgatcaa
aatggggtctatctgtgggttaatcaggcaatgtttacgggagcttctaatgttgaatcc
tatggaagtgggaaagaaatagtgagtgttaagttgccatctgtctcttcaatagaacgt
tctgaagataacgattctgataagcccattgtaatccactccaaagttgccatcagttct
catactccactttctgataagcaaattccagatctagtgactctctcattattgcccaag
agccagtggcaaagcttgatcaatttagacattataaaggctcgcaacaaaccaattgag
cctccaaggaaaccggaaaaggcacctttcttcctgccttcagttccatctctttctgga
gaaataatttttaaacctacagaatcagctgatgaagagaaggataaaaaagctgataaa
ctcgaagaaagtcggaaacaagctgatttggctttgcccttgccccattttgtgcaactt
cttcatgccgctgcagacatgaaaaatttttcggctttcactgattatattaaaagttta
tcttcgtcaactttggatatggaacttagaatgcttcagattatagatgacgatgatgac
caggaacccgagaagagaccagagttccattccgttgaactgttgttggattatttaatt
catgagatcacctgtagaaacaactttgagtttatacaagcagtcatcagattgttttta
aagatccatggtgaaacaattcgccgacaaccaaagttacaagataaggcgcgaaagctt
ctagaaattcaaggtgcagtttggcaaagagtagataggttgttccaaggtgctagatgc
atggtcacatttctcagtaactctcaattttag

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