Actinidia eriantha (wild kiwifruit): 130795341
Help
Entry
130795341 CDS
T09464
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130795341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130795341
03019 Messenger RNA biogenesis [BR:
aew03019
]
130795341
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130795341
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
130795341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
Pcf11_C
Motif
Other DBs
NCBI-GeneID:
130795341
NCBI-ProteinID:
XP_057513369
LinkDB
All DBs
Position
15:9267139..9278967
Genome browser
AA seq
1100 aa
AA seq
DB search
MEMESSRRPIDRSRAEPNLKKPRLAEESIVNRNSLSGSNPSRYRANDRDRDSESSDSVRG
PHHQQQQHQELVDQYKTAIAELTFNSKPIITNLTIIAGENLHAAKAITATVCTNILEVPS
EQKLPSLYLLDSIVKNIGRDYIKFFAARLPEVFCKAYRQVDSSIHSGMRHLFGTWKGVFP
SQALQMIEKELGFPPAVNGSSSGSTTSRPDSQSQRPAHSIHVNPKYLEARQRLQSTRAKE
VANDNTGIVVNLPEDAERVDRAVGIGSGRPRADPLPKMPNIQRSHRDAPNESTREINIGA
AYGDYEYDSDLSRHTGLGIGRASERAADRGFDKPWNRAVGNMAETMSSQRNGFDIKHGFP
SYSAPGLMNTDEHILPTQKIPGKSTGGVNRSWKNSDEEEFMWDDVNSRSSDHVAINSSKR
DRWTPDDSERLGNENHLRKPHGIRDVGSMVDREALIDSVSTEQKDQPSFGHRMSPLWSQE
SQLTNGINHSNSARTISGHSEGFPSSLSGLSTSASSLAKTSFLSQMGPSNIGTSSSGFLT
NPVSGPTGLMGQRYSIGVASPSGHSPIHQNPPSPSLAHHSHQLLHNLADQDHLQAQPLPL
SELRKSSGPLNMTPHNQFSQDSFPVHPQNIHIGNLQKLQTPNIQTSSSMIRSNQQRQRTP
FVQHLPTDPRLSEPSNQSQKLQLPQNVAPGNPSTSGNSSLDHANFPAAEIRGQSSTATLL
ASIVKNGILTSNAVTGNLPKLSFQDSGAILSHSVVPPPLPSGLPPTQFTFSGPRVAFGTL
PSLPLHDNASASTTFSKKKVEQPPLPSDPPPSSLMSSASAQSSTVNAVSNPVSSLLSSLV
AKGLITASKTESSTSVSQKIPTQLQNKKASIITTSSVLVSSVPATSTIAVSSKKDQLSKP
VAKSSIAIPQCTPEDIKALIGFEFKSHVIRKSHQSVITDLTDDLPHQCSICGLRLKLKER
FHRHLEWHALRNPDVNGPKASRRWYADSADWVAGKASGCELTGVLEAAPGEGVEKNEEMV
PADETQCVCVLCGELFEDFYSQERDEWMFKGAVYMTIPMGELGTSMESTAQGPIVHANCI
TESSVRDLGLVNSVKLEKDA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagagttctcgtagaccaattgacagatcgagagccgaaccgaatctgaag
aaacctagattggccgaagagtccatcgtcaatcgcaattcgttatcaggttcaaatccc
tcaagatatagagctaatgatagagatagagactcagagagtagtgattcagtgcgagga
cctcatcatcagcaacaacagcatcaagaacttgttgatcagtacaagactgccatcgcc
gagctgactttcaattcgaaacccatcattactaacttgaccatcatcgccggcgagaac
ttgcacgccgcaaaggcgatcacagccaccgtctgcactaatattctcgaggttccaagt
gagcagaagcttccgtcgctttatcttttagacagtattgtgaagaatatcgggagggat
tacataaaattctttgctgccagattacctgaggtattctgtaaggcatatagacaggtt
gactcttctatacattctggaatgcggcatctttttggaacttggaaaggagtcttccct
tctcaggcacttcagatgattgagaaagaacttggttttccacctgctgtcaatggttcg
tcttcaggatctacaacatccaggcctgattcacagtctcaacgtccagcacacagtatt
catgtaaatcccaagtatttggaggctagacaacgtcttcagtcaaccagggcaaaagag
gtggccaatgacaatactggaattgtggtgaacttacctgaagatgcagagagagtggac
agggcagttgggattggttctgggaggccacgggcagatcctcttcctaagatgcctaat
attcagcgttctcatagagatgcaccgaatgagtccactcgtgagataaacataggtgca
gcatatggagattatgaatatgattctgatctatcaaggcatactggcttgggaattgga
agagcaagtgagagggctgcggatcgaggatttgacaagccttggaatagagctgtcggg
aatatggcagagacaatgtctagccaaaggaatggttttgacatcaagcatggttttcca
agttattctgcccctggattgatgaacactgatgaacatatactgccaacacagaaaatt
cctggtaagagcaccggtggggtgaataggagctggaagaactccgatgaagaggaattt
atgtgggacgacgtgaattctagatcaagtgatcatgttgcaatcaatagctcaaagaga
gatcgctggacccctgatgattctgaaagattgggcaacgaaaaccacctccggaaacca
cacggcatacgtgatgttggttcaatggttgatagggaagctttaattgattcagtgtcc
acagaacagaaagatcaaccatcttttgggcataggatgtcacccctttggagtcaggag
tcgcaattaacaaatgggatcaaccattcaaactctgctagaactatctctggtcattca
gaaggatttcctagttctttaagtggattgtccacatctgcaagttctctagccaagacg
tcatttttgtcacagatggggccatcaaatattggtacctcaagttctggatttttgacc
aatccggtttcaggtcccactggattgatggggcagcggtactctattggagttgcgtct
ccatctgggcactcacccatacaccagaatcctccctcaccttcactagcgcaccattcc
catcaattattgcacaatttggctgaccaagatcatctgcaagctcagccccttcctctt
tcagaattaagaaaatcttcaggaccattaaacatgacgccgcataatcagttttctcag
gattctttccccgtgcatcctcagaatattcatataggaaacttgcaaaaattgcaaacc
ccgaatatacagacttcatcttctatgattcgttcgaatcaacagaggcagcggacacct
tttgtgcaacatctaccaacagaccccagactgtctgagccttctaaccagtcccaaaaa
ttgcaattgcctcagaatgtagctcctggaaatccctcaacttctgggaattcttcattg
gatcatgcaaactttcctgctgcagaaatccgaggtcaatcaagcacggctactttgttg
gcttccatagtaaaaaatggaatactcaccagcaacgctgttaccggtaaccttcctaaa
ttgagttttcaggattctggggcaatattatctcactccgttgtaccgcctcctctgcca
agcggtctaccacctactcaatttacattctcaggcccccgagttgcatttggaactcta
ccaagtctacctctccatgataacgcatctgcttccacaactttttctaagaaaaaggta
gaacagccaccactgccatccgatcctccaccttcctcactcatgagtagtgcatcggcg
caatcttcaacggtgaatgctgtctctaatccagtgtcaagtctgctcagctcattggtt
gcaaagggattaataactgcatcaaagacggagtcatcgacatctgtgtcacagaagatt
cctactcaactccaaaacaagaaagcaagcataatcacaactagttcagtgcttgtttct
tcagttccagctacctcaactattgcagtttcatccaaaaaggatcagctttccaagcca
gtggctaaaagctctattgccatacctcagtgcactccggaagatataaaagctctcatc
ggatttgagtttaaatcacatgtaattcggaagtcccatcaatctgtgattactgatctc
actgatgaccttcctcatcagtgcagcatttgtggtcttcgacttaaacttaaagaacga
tttcacagacacttggagtggcatgcattgagaaatcctgatgtgaatggtccaaaggct
tcaaggagatggtatgcagactcagcagattgggtcgctggaaaggcttcgggatgtgaa
cttactggtgtgttggaagcagcacctggtgagggagttgagaagaacgaggagatggtt
cctgctgatgaaactcaatgtgtgtgtgttttgtgtggtgaactttttgaagatttttac
agtcaggaaagggatgaatggatgttcaaaggcgctgtttacatgaccatccccatggga
gagctaggaacttcaatggagagtactgctcagggtcctattgttcatgcaaactgcata
acagaaagttccgttcgggacttgggactggtcaatagtgttaaattggaaaaggatgca
taa
DBGET
integrated database retrieval system
