Actinidia eriantha (wild kiwifruit): 130795506
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Entry
130795506 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130795506
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130795506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130795506
03041 Spliceosome [BR:
aew03041
]
130795506
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130795506
Spliceosome [BR:
aew03041
]
Complex B
Other components
Prp19-related factors
130795506
Complex C
130795506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_19
ARM_TT21_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
130795506
NCBI-ProteinID:
XP_057513616
LinkDB
All DBs
Position
15:complement(17401404..17409244)
Genome browser
AA seq
914 aa
AA seq
DB search
MAIPQELYPSQDDLLYEEELLRNPFSLKLWWRYLVARTESPFRKRAVIYERALKALPGSY
KLWYAYLRERLELVRNLPITHTHYQNLNNTFERALVTMHKMPRIWIMYLLILTEQKLLIR
TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGVPIETSLRVYRRYLKYDPSHIEDFIEFL
VNSSLWQEAAERLAGVLNDDQFYSIKGKTKHRLWLELCDLLTKHAKEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRDLVEKARDVFDEGMTTVVTVRDFSVIFDAYSQFEESML
AFKMDGESEDEGDDGEENDEEDDDDRLDVGKLEKKLKGFWLSDDKDVDLRLARLEHLMDR
RPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDTMKAVGKPHTLWVA
FAKLYENHKDVANARVIFDKSVQVNYKTVDNLASVWCEWAEMELRHKNFNGALELMRRAT
AEPSVEVKRRVAADGNEPVQMKLHKSLRLWAFYVDLEESLGTLESTRAVYERILDLRIAT
PQIIINYAMLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKLERAR
ELFEHAVEVAPAESAKPLYLQYAKLEEDYGLAKRAMKVYDQATKALPPNEKLSMYEIYIA
RAAEIFGVPKTREIYEQAIESGLPDKDVKTMCMKYAELEKSLGEIDRARGVFVYASQFAD
PRSDPDIWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDKQPNLDE
TMDALKKAGVTEDEMAALEKHLVPAATNTSTKDGDRKVGFVSAGVESQTDGGIKVAANHE
DIELPEESDSEDDERVEIAQKDVPSAVFGGLIRKREEADNDANGDDTATAATKDKDGDAH
LGALERIKRQRRGL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccacaggaactctacccgagccaagacgacctcctctacgaagaagaactt
ctccgcaaccccttcagcctcaagctatggtggcgctacctggtggctcggaccgaatcc
ccgttcaggaagcgcgccgtcatctatgagcgagccctcaaggccctccccggaagctac
aagctctggtacgcctacctccgcgagcgcctcgagctcgtccgcaacctccccatcaca
cacacacactaccaaaacctaaacaacaccttcgaacgagccctcgtaaccatgcacaaa
atgccccggatttggatcatgtacttgctaattttaacggagcagaagctcctcattcgc
acacggcgcaccttcgatcgcgctctctgcgcactaccggttacgcagcacgatcggatt
tgggagccctacttggtgtttgtgagccagaagggtgttccgatcgagacctcgcttagg
gtttataggcggtacttgaagtatgacccctctcatatagaggattttattgagtttttg
gtgaattcgagtctctggcaagaggctgcggagaggttagcgggggttttgaatgatgat
cagttttattcgattaaagggaagacgaagcataggttgtggcttgaactgtgtgatttg
ctgactaagcacgcgaaggaggtttcggggttgaatgtggatgcgataattaggggagga
attaggaagttcacagatgaggttgggcggctttggacttcactggctgattattatatc
aggagggatttggtggagaaggcaagggatgtgtttgatgaggggatgactacggttgtg
acggtgagggattttagcgtgatttttgatgcgtattcgcagtttgaagagagtatgctt
gctttcaagatggatggagagagtgaggatgagggagatgatggagaagaaaatgatgaa
gaggatgatgatgaccgtttggatgtggggaagcttgagaagaagcttaaaggattttgg
ttgtctgatgataaagatgttgatttgaggttggcacggttggagcatctcatggatagg
aggccggaactggctaacagcgtgcttcttcgccaaaacccacataatgtggaacagtgg
caccgtcgggtaaaactttttgagggtaaccccacaaagcaaattctgacttacacggag
gcagtgaggacggttgacaccatgaaagctgtggggaaacctcatacattatgggttgct
tttgccaagttgtatgagaaccacaaggatgttgccaatgcaagagtaattttcgataag
tcagtgcaggtgaactacaaaactgttgataatttggctagtgtttggtgtgaatgggct
gaaatggaacttcgacacaagaactttaatggggcgcttgagttgatgaggcgtgcaaca
gcagaaccatcggtggaggtgaaacggagagtggctgctgatggcaatgaaccggtacag
atgaaactgcacaaatccttgaggctttgggcattctatgttgatttagaggaaagcctg
ggtaccttagagtcgacacgtgcagtttatgaacggatattggatcttagaatagccaca
ccacaaatcataattaactatgctatgcttttggaggaacacaaatactttgaggatgca
ttcaaggtatatgaacgaggcgtcaagatttttaaatatccgcatgtaaaggacatatgg
gtcacatatctgtccaagtttgttaaaagatatgggaaatcaaaactggaacgtgcaaga
gagttgtttgagcacgctgttgaagtggcccctgctgaatctgcgaagccattgtaccta
caatatgctaaattagaggaggattatggtctagcaaagcgagcaatgaaggtttatgat
caagctacaaaggcacttccacccaatgaaaagttgagcatgtatgagatctacatagct
cgtgctgctgagatatttggggttccgaaaacaagggaaatatatgagcaagcgatagaa
tctggacttccagacaaagatgtgaagaccatgtgcatgaaatatgcggagctggagaag
agtcttggagaaatagatcgtgctcgtggagtttttgtatatgcatctcaatttgctgat
ccgcgatcggatcctgatatctggaacaaatggcacgagtttgaggtgcagcatggcaat
gaagacaccttccgggaaatgctacgaatcaaacgtagtgtttctgcaagctatagccag
acacacttcatccttcctgaatatttgatgcaaaaggacaagcagccaaatcttgacgaa
acaatggatgcattgaaaaaagctggtgttactgaagacgaaatggctgctctggagaag
catttagttcctgcagccactaacacttccaccaaagacggtgataggaaagtgggcttt
gtgagtgccggagtggagtctcagaccgatggagggataaaagtcgctgcaaatcacgag
gatattgagcttccggaggagagtgactcagaagacgatgaaagagttgagattgcccaa
aaagatgttccctctgccgtctttggtggtttgattcggaagcgggaagaggctgataat
gatgcaaatggagatgacactgccaccgcagctactaaagataaagatggtgatgcccat
ctcggtgcgctggagagaataaaaaggcaaaggcgaggactatag
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