Actinidia eriantha (wild kiwifruit): 130795824
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Entry
130795824 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130795824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130795824
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130795824
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
HECT type E3
130795824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
PDS5
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
130795824
NCBI-ProteinID:
XP_057514068
LinkDB
All DBs
Position
15:8255930..8266985
Genome browser
AA seq
1575 aa
AA seq
DB search
MGNRGQKRVGTIDELSVDKRACSSLEVRPSSSNSSVQTPMNPSNSTVEAHDGDMDTSSSY
SXSTRSEGEVEKDSAYGSSDSDGEPRHHSLREYQRQRSSGDYGKFKRVLSSLGQEVDESG
TLAALTELCELLSFSTDSSLSSLMADSLSPILVKLARHESNPDIMLFSIRAITYLCDVHS
RSAGFLVRHDAVPALCQRLMAIEYLDVAEQCLQALEKISREQPLVCLQSGAIMAVLTYID
FFSTSVQRVALSTVANVCKKLPSECPSPFMEAVPTLCNLLQYEDRQLVETVATCLIKIVE
RVRLSSDMLDELCKHGLIHQTTSLIDLNGRTTLSQPVYTGLIGLLVKLASGSIVAVRTLF
ELNISSILKDILSTPDLSHGLVSPNMVDGHCNQVYEVLKLLNELFPAIARDLNVPLNSEK
EDFLVNQPDFLQKLGMDLLPILIQVVNSGANLYVCYGSLSVINKFVYFSKSEMLIELLKD
TNISSFLAGVFTRKDEHVLMLALQIADTVLQKLSDIFLNSFVKEGVFFSIDALLMPEKCS
QSMFPIFNGIQLSNDPSQKSDARNILRCLCYTFDTGQSLSASETGTCKLEKDSVHTIANK
IRANYIAAELLNPDKGLTDILQKLRTLAAALTDLVNTSMTRDARTQHEEEFHSMLHQIMA
QVNGGDPISTFEFIESGIVKALVNYLSNAHFLRENTELTDGFSKKKNIEKRFEVFGRLFL
SSLDAPLEDFCLSVVTRKLQTALSSVENFPIILSQSYRQRNSYATVPYGRCMSHPCLRVQ
FMRGDGETALFDFSKDVLTVDPFSSLDSIEGYLWPKVGKNRVEHLKSAATQVPGGLESLP
SELPSDVNSPGGKSPDLMDSDSVPSDMQEMQFSPPQEDKANISHSAPEEGDNLRQTASET
TGSSNAPADHVQEEETGQRTLSKEDTEMSTRYSEFSGNEDASPALLFYLEGQQLDRALSL
YQAILQQQINAGDDIVNSAKLWSQVYRVTYRRAEKPRQSYPPDSQHQAHDSSSSDRSGTY
WQYTPFFPGMFASELEKSSPVSDVLFLLKSLEGINRFRFHMMTHERMYAFAKGRIDNLDN
LEVMTSAAPDNEFVSSKLTEKLEQQMQDPLAVSVGGMPSWCGQLMASYPFLFAFEVRCKY
FQLTAFGQLQAQPHPTAHNGSGSMNGRRQNASGLPPRKKFTVCRNHILESATQMMDLHAR
QKAILEVEYDEEVGTGLGPTLEFFTLVSHEFQKSGLGMWREDHGLLPWKISQAEDSQLLV
SPCGLFPRPWSSIENTSTGKEFSEVIKRFVLLGQVIAKALQDGRVLDIPFSKAFYKLILG
QELTAYDIYSFDPGLGRTLLEFQAVVERHRYFESVCGENSTLKLDSCFRNTTIEDLCLDF
TLPGYPDYILTPGHDPKLVNMTNLEEYVSLVVDATINAGICRQVEAFKSGFNQVFLIEHL
QVFTEEELERLLCGECEFWTSNELLDHIKFDHGYTASSPPVVNLLEVIREFDREQQRAFL
QFVTGAPRLRRGGLASLNPKLTIVRKHCSKLVDADLPSVMTCANYLKLPPYSSKERMKEK
LLYAITEGQGSFHLS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgaggccaaaaacgggtcggaaccattgatgaattgtctgtcgataagcgc
gcgtgtagttcattggaggtgaggccgagttcatcgaactcatcagttcaaactccaatg
aacccctcaaattcaaccgtcgaagcccacgatggcgatatggatacttcgtcgtcctat
tcgnggtcaactcgatcagagggcgaagttgagaaggattctgcctatgggtcatctgat
tcggatggagaaccgaggcatcacagtcttcgcgagtatcagaggcagagatcttcgggt
gattatggaaagtttaagagggttttgtcgagtttgggccaagaggttgatgaatctggg
acattggctgctcttactgagctatgtgaattgttatccttttctactgatagttcgttg
tcaagcttgatggcagactcattatctccaattcttgtgaagttggcaaggcacgagagc
aatcctgatataatgcttttctctatcagggctataacttatttgtgtgatgtgcattct
cggtccgctggttttcttgtacggcatgatgcagtccctgctctttgtcaaagattaatg
gccattgagtaccttgatgtagctgaacaatgtttgcaagctttagagaaaatctcacgt
gagcaaccgcttgtgtgcttacaatccggagcaatcatggctgtcttaacttacattgat
tttttctcaacaagtgtgcagagagttgcactttcaactgtggccaatgtatgtaagaaa
cttccttctgaatgtccttcacctttcatggaagcagttccaacattgtgtaatcttctt
cagtatgaggatcggcagcttgtagagactgtggccacttgcttgattaagatagtagaa
agagtacgcctctcttctgacatgctggatgaactatgtaaacatgggctgattcatcaa
acgactagtctcatagacttgaatggtcgaaccacattatcccaaccagtttacacaggc
ttgattgggctactggtgaaacttgcttctggttcaattgttgctgtcagaactcttttt
gagcttaatataagcagtatattgaaggatatcttgtctactcctgatctttcacacgga
ttggtttctcctaatatggttgatggacattgcaatcaggtgtatgaagttttgaagtta
ctaaatgagcttttccctgctatagccagagatctcaatgttcctttaaattcggagaag
gaagattttctggtaaatcaacctgattttctgcaaaaacttgggatggatttgcttccc
atattgatccaggtggttaattctggtgcaaatttatatgtttgttatggcagtctctct
gttattaacaaattcgtttacttcagcaaatctgaaatgcttattgagttgcttaaggac
actaacatttcaagtttcttagctggagtattcactcggaaggatgaacatgtgctgatg
ttggccttacagattgctgatactgtcctgcaaaagctttctgatatcttcttgaactct
tttgtgaaggaaggcgtctttttttccattgatgctcttctaatgccagagaagtgctca
caatctatgtttccaatatttaatggcatccaactatccaatgatccaagtcaaaagtct
gatgcaaggaatattctcagatgcttgtgttatacttttgatactggtcagtctctatca
gcttctgaaacaggtacctgcaaacttgaaaaagattcggttcacactattgcaaacaag
ataagggccaattacattgctgcagaattactaaaccctgacaaaggattaactgatatt
cttcagaaactcagaactttggctgccgcactaacagatttagtgaacacatccatgaca
agagatgctcgtacacagcatgaagaggagttccattccatgttgcatcaaattatggca
caggttaatggaggcgatcccatttcaacttttgaatttattgaaagtggaattgtgaaa
gcattagtgaattacttatccaatgcacactttctgagagaaaacaccgagcttactgat
ggatttagtaaaaaaaaaaatatagagaaaagatttgaagtgtttggaagactattctta
tcttccttggatgcgcctttggaggacttctgtctgtcagttgtgaccagaaaattgcaa
actgcactgtcttcagtagaaaattttcccattattcttagccagtcatataggcaaagg
aactcatatgctactgttccatatggacgatgcatgtcacacccttgtctaagagttcag
ttcatgaggggagatggggaaactgctctgttcgatttctctaaagatgttctgactgtt
gatcctttttcttctctggattctattgaaggatatttgtggcctaaagttggaaaaaac
agagtcgaacatttaaaatcagcagccactcaagttccgggtggattggaaagtttgccc
tctgaattaccatcggatgtgaactctcctggaggcaaaagtccagatcttatggactct
gatagtgtgccctctgatatgcaggagatgcagttttctccaccgcaggaggacaaggct
aacatatctcattcggcccctgaagaaggggataatttaagacaaaccgccagtgaaaca
acaggttcaagcaatgcgccggctgaccatgtacaagaggaggagactggacaacgcact
ttgtcaaaagaggatactgaaatgagcacacggtactctgaattctctggcaacgaagac
gcttcaccggcactgttattttaccttgaagggcaacaactagaccgagctttgtcactc
tatcaagcaattctccaacaacaaattaatgctggagatgacattgttaacagtgcaaaa
ttgtggagtcaagtatacagagtaacgtatagaagagctgagaaacctagacaaagttat
cccccagatagtcaacatcaggctcatgattcttcctcgtcagacagatcgggaacatat
tggcagtatactccattttttcctggcatgtttgcttctgaattggagaagtccagtcct
gtttctgatgtattatttctccttaaaagtttagaaggcattaacaggtttaggtttcat
atgatgacccatgaaaggatgtatgcctttgcgaaagggagaattgataacttggataac
ttagaggtaatgacctctgctgccccagataatgagtttgtgagctctaaactgaccgag
aaactggaacagcagatgcaggaccctttggctgtgtccgttggtggtatgccttcatgg
tgtggccagttaatggcttcgtacccatttttatttgctttcgaggtaagatgcaagtac
tttcaattgacagcatttggtcagctgcaagctcaaccacatccaacagctcataatggt
tcaggaagtatgaatgggagaaggcagaatgccagtggattgccacctcgtaagaaattt
accgtatgccgaaatcacattctagagtctgccacccagatgatggacttacatgcccgt
caaaaagctatacttgaagtggaatatgacgaagaagttggtactggtcttgggccgaca
ttggaattctttaccctggtcagtcatgagtttcagaaatctggcctgggcatgtggaga
gaagaccatggattattaccttggaaaatctcgcaggctgaagattctcaacttttggtg
tctccttgtgggttattccctcgtccttggtcatccatagagaatacatcaactggcaaa
gaattctctgaagttatcaaaaggttcgtccttctgggacaggtcatagcaaaggctctt
caagatggaagagttttggatatccccttctccaaagctttttataaacttattcttggg
caggaactcactgcatatgatatctactcatttgatcctgggcttggtaggactctgcta
gagttccaagctgttgttgaaagacacagatattttgaatctgtttgtggagaaaactct
actttaaaacttgactcgtgcttccggaatacaacaattgaggatctttgtcttgatttt
actcttcctggatatcctgattatattcttactcctggacatgatcctaaattggtaaat
atgacaaacttggaggaatatgtttcactagtggtggatgcaactataaatgctggaatt
tgcagacaggtggaagctttcaaatcagggtttaaccaggttttcctcatcgaacatctt
caggtcttcactgaagaggaattagagcgtctattatgtggagagtgtgaattctggaca
tcgaatgagcttttggatcatattaagttcgatcacggatacacagcaagcagtcctccc
gttgtcaaccttttggaagtaatacgggagttcgatcgagaacagcaacgcgcattcttg
cagtttgtgacaggggcgcctaggcttcgtcgtggtggtttggcatctctcaacccgaaa
ctgacaattgttcgcaagcattgtagcaaattggttgatgctgacctgcccagcgtgatg
acttgtgccaattatctgaagctgcctccttactcttcaaaagagaggatgaaagagaag
ctcttgtatgccataactgaagggcaaggatctttccacctgtcttag
DBGET
integrated database retrieval system
