Actinidia eriantha (wild kiwifruit): 130795961
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Entry
130795961 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: periodic tryptophan protein 2-like
KO
K14558
periodic tryptophan protein 2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130795961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130795961
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130795961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Utp12
EIF3I
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
DSE1_N
PAC11
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_SPT8
Beta-prop_VPS8
ASA1
Beta-prop_NOL10_N
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_DCAF4
WD40_like
Beta-prop_ACSF4
WDR54
Beta-prop_DCAF12
Utp21
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
130795961
NCBI-ProteinID:
XP_057514186
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All DBs
Position
16:3088290..3093940
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AA seq
890 aa
AA seq
DB search
MNYRFQNLLGAPYRGGNAIVTDNTLLISPIGNRISVTDLLKSETTTLPFQSSSNIARIAA
SPDGVFLLAVDENYRCLFVNLRRRAVLHRISFKKPVAAAKFSPDGAFIAVAVGKLLQIWR
SPGFRKEFFPFELVRTFAHCDDKITALDWSPDSNYVLAGSKDLTVRLFCLKKFSNYYKPF
LFLGHRDTIVGAFFGIDKKTNRVSRAYTLSRDGAIFSWSYGGSDDKLGGESSEPLSPGTP
EHRPNQSDDGDVNANAKKXKNFNKGESNLDDKNGYLLHSGKWXLLKKDYFMQAPAKLTAC
DYHRGLDLVVVGFSNGVFGLYQMPDFICIHLLSISREKITTAXFNDLGNWLTFGCAKLGQ
LLVWEWKSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKIKVWTVSSGFCFVTFSEH
TNAVTALHFMASNHCLLSASLDGTVRAWDLFRYRNFRTFTTPSSKQFVSLASDQSGEVIC
AGTLDSFEIFVWSMKTGRLLDVLSGHEGPVHGLMFSPTNATLTSSSWDKTVRLWDVFEGK
GAVETFPHTHDVLTVVYRPDGKQLASSTLDGQIHFWDPIEGLLMYTIEGRRDIAGGRLVT
DRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQVTHNLSLDGV
LDFLNSKKMTEAGPLDLIDDDNSDEEQGVDKQTRGNLGYNLPGSMPNRGRPVIRTKCLRI
APTGRSWAAATTEGVLIYSMDESFIFDPTDLDIDVTPEAVDAALNEDQPSRALILSLRLN
EDSLIKKCIVAVSPADIPVVASSVPFRYLQRLIEALADLLESCPHLEFILRWCQDLCKAH
GLSIQQNSRNLLPALKSLQKSITRLHQDLAETCSSNEYLLRYLCSAGTKQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccgcttccagaacctcctcggcgcgccgtaccgcggaggaaatgccatcgtc
accgacaacaccctcttgatctcccccatcggcaaccgcatctccgtgaccgacctcctg
aagtcggagaccacaaccctcccattccagtcttcctccaacattgcccgcatcgccgcc
tcccccgacggagtcttcctcctggccgtcgacgaaaactaccgctgcctcttcgtcaac
ctccgccgccgtgccgttctccaccgcatctccttcaagaagcccgtcgccgccgccaag
ttcagccccgacggagccttcatcgccgtcgcggtggggaaattgctccagatctggcga
tcccccgggttcaggaaggagttctttccgttcgaactggttcggacttttgcccattgc
gacgataagatcacggcgttggattggagtcctgactcaaattatgtgcttgcaggatcg
aaggatttgactgtgaggttattttgtttgaagaaatttagtaactattataagcccttc
ttgtttctaggtcacagggatacaattgttggtgctttttttggtattgataagaaaact
aatagggtttctagggcttatacactgtcacgcgatggtgcgattttcagctggagttat
ggtggtagtgatgataagttaggaggggaaagttcggaaccactctctccgggtacgcct
gagcataggcctaaccagagtgatgatggtgatgttaatgctaatgcgaagaaanggaag
aattttaataagggagagagtaatttggacgacaaaaatggatatttgttgcattcaggg
aaatggnagttgttgaagaaggactactttatgcaggctccggcgaagttgacggcctgt
gattatcatcggggtcttgatcttgtggttgtggggttctctaatggggtgtttgggctg
tatcagatgccggactttatttgcattcacttgttatcaatatcgagagagaagattaca
actgctngttttaatgatcttgggaattggttgacttttggctgtgcaaaacttgggcag
ttgcttgtctgggaatggaagtccgaaagttacatcttgaaacagcagggccattacttt
gatgtgaactgtcttgcgtattctccggattcacaactcttggccacaggagctgatgac
aacaaaatcaaggtgtggactgtttcctcaggcttctgttttgtgacattttcggagcac
actaatgcagtcactgcacttcattttatggccagcaaccattgtctcttgagtgcatct
ctcgatgggactgttcgagcatgggatcttttccgctatcggaattttcggaccttcact
accccttcttctaagcaatttgtttctttagcatcggatcaaagtggtgaagtaatttgt
gccggaactcttgattcatttgagatttttgtctggtcgatgaagacagggcggctgttg
gatgttcttagtggtcacgagggtcctgttcatgggcttatgttttctcctacaaatgcc
accttaacttcatcttcctgggacaaaactgttcgcttgtgggatgttttcgaaggaaag
ggtgcagttgaaacatttccccacacacatgatgttcttacagttgtttatcgaccagat
ggaaagcaattggctagcagcacattagatgggcaaatccatttctgggatccaattgaa
ggcttgttaatgtacacaattgagggtcgtagagacattgctggtggccgtcttgtgact
gatcgtaggtcagctgctaattctagttctggaaagtgcttcacgaccttatgttattcc
gctgatgggagttacattttggctgggggaagtagcaaatacatttgtatgtatgatgtt
gctgatcaggtactgctccgaaggtttcaagtaacccacaatctctctctggatggagtt
cttgacttcttgaactcgaagaaaatgacagaagctggcccactggatttgattgatgat
gataatagtgatgaagagcaaggtgttgataaacaaaccaggggtaatttaggttataat
ttaccaggatccatgcctaaccgtggtaggccagttatccggacaaaatgccttagaatt
gcaccaactggaaggagttgggcagcagcaactacagagggggttctaatttattccatg
gatgaatcctttatctttgatcccaccgatctcgacatagatgtgacaccagaggcagtt
gatgcagcactgaatgaagatcaaccaagtagggctttgattcttagtttacggttaaat
gaagattctctgatcaaaaagtgtatagttgctgttagtccagcagatataccagttgtt
gcttcgtcagtcccattcagatatttgcaaaggttaatagaagcattggcagatcttctg
gaaagctgtccacacttggagtttattcttcggtggtgtcaggacctctgtaaagctcat
gggctctctattcaacagaactccaggaatttgcttcctgctctaaaatcgttgcaaaag
tcaatcaccagattacatcaagatttggcagaaacatgttcttccaatgaatatttgctt
cgatatttatgctctgctggaaccaaacaatga
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