Actinidia eriantha (wild kiwifruit): 130796069
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Entry
130796069 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130796069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130796069
03009 Ribosome biogenesis [BR:
aew03009
]
130796069
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130796069
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130796069
Complex B
130796069
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
Helicases
130796069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130796069
NCBI-ProteinID:
XP_057514334
LinkDB
All DBs
Position
16:1877306..1884651
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AA seq
503 aa
AA seq
DB search
MSRYDSRSADPGSYRDRKSDSGFGGASGYGGARSSSSRRDYDGAETPRKLDLDGLTPFEK
NFYAESASVAAMSERDVEEYRRRREITVEGRDVPKPVKAFRDVGFPDYVMQEIAKAGFTE
PTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLETHQ
TNLRRVTYLVLDEADRMLDMGFEPQIQKIVSQIRPDRQTLYWSATWPKEVEQLARRFLYS
PYKVVIGSPDLKANHAIRQHVEIVSENQKYNKLVKLLEDIMDGSRILVFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELAAMGRGA
PPPPGLGGFRDRGRGYGGGRSWN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccgccgaccccggctcgtaccgcgaccgcaaaagtgat
tcggggtttggtggggcttctggctatggtggggctcgttcgtcgtcgagcaggagggac
tatgacggggccgagacaccgcggaagttggatttggacgggttgactccattcgagaag
aatttctatgcggagtcggcctcggtggctgcaatgtcggagagagacgttgaggagtac
cggcggcgaagggaaatcaccgtcgaaggccgggatgtgccgaagccagtcaaggctttt
cgtgatgttgggtttccagattatgtcatgcaagaaattgcaaaagctggctttactgaa
cctacagcaattcaagctcaaggatggccaatggctttaaagggccgtgatctcattggt
attgctgaaacaggttcaggcaagacacttgcctacctgttgcctgcaattgtccatgtc
aatgctcaaccaattttagcccctggagacggtcccattgtgttagttctagctccaacc
cgcgaacttgctgttcagatacagcaagaagccactaaatttggtgcatcatcaaggatt
aaaaatacctgcatatatggtggggttccgaaggggccccaagttcgtgatctccagaaa
ggtgttgaaattgttattgcgactcctggaaggttgattgatatgttggaaactcatcag
acgaacttgcgaagggtaacgtaccttgtgttggatgaggcagatcgaatgcttgacatg
ggctttgaacctcagattcaaaaaattgtttctcagattcgacctgatcgtcaaacccta
tactggagtgctacttggccgaaggaggttgaacaacttgcaagacggttcctgtacagc
ccatacaaagttgttataggttccccagatttgaaagccaaccatgcaattcgccagcat
gtggaaattgtttccgagaaccagaaatataacaaattggtgaagttgctggaggacatc
atggatggtagccggattttggtattcatggatacaaagaaagggtgtgaccagatcact
aggcaacttcgcatggatggatggcctgctctctctattcatggagataagagtcaagcg
gagagggattgggtcctctcggagtttaaagctggcaagagtcctataatgaccgcaacc
gatgttgcagctcgtggtttagatgtgaaggatgtgaaatatgtgatcaactacgacttt
cctggatccctagaggattacgttcaccgcattggtcgaacaggaagagctggggccaaa
ggaacggcatacacttttttcacagctgcaaatgccagatttgctaaagacctcataaac
atccttgaggaagctgggcagaaggtcagtcctgagctggcagcaatgggtcgtggggca
cctcctcctccaggtctcgggggttttcgagatcgtgggcggggttacggtggtggtcgc
tcttggaactaa
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