Actinidia eriantha (wild kiwifruit): 130796078
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Entry
130796078 CDS
T09464
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130796078
03420 Nucleotide excision repair
130796078
03430 Mismatch repair
130796078
03440 Homologous recombination
130796078
03460 Fanconi anemia pathway
130796078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130796078
03032 DNA replication proteins [BR:
aew03032
]
130796078
03400 DNA repair and recombination proteins [BR:
aew03400
]
130796078
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130796078
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130796078
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130796078
MMR (mismatch excision repair)
130796078
DSBR (double strand breaks repair)
HR (homologous recombination)
130796078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
VirArc_Nuclease
Rhabdo_glycop_CD
BRC-2_C
Motif
Other DBs
NCBI-GeneID:
130796078
NCBI-ProteinID:
XP_057514348
LinkDB
All DBs
Position
16
Genome browser
AA seq
626 aa
AA seq
DB search
MAKRVSPDAISSLLANPSPDSSSEVPEIVVQVLDLKPTGSKYMFTASDGKMKLKALLQSS
LSSEVLSGNIQNLGLIRILDYTVNDIPTKNEKFLIVIKCEVVSPALEAEVKSDGTIEESG
IILKPKQEMDIKSEVKSEGLGMILKPKQELIAKSAAQIVHEQNGNMAPAARLAMTRRVHP
LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELSDEDGTQIQATMFNEAARKF
YDKFQLGKVYYISKGTLKVANKQFMTVHNDYEMTLNENSEVEEASNEATFIPETKFNFVP
IDQLGPYINSKELVDVIGVVQNVSPTMSIRRKINNETVPKRDITIADETKKTVVVSLWND
LATNVGQELLDISDKSPVVAIKSLKVGDFQGISLSALSKSIVVVNPETPESKKLRSWYDA
EGKETSMASVGAGMSPTTNSGGRSMYSDRVSLSHITGNPSLGEDKPVFFSIRAYISLIKP
DQSMWYRACKTCNKKVTEVIGSGYCCEVCQKYDSECNLRYIMVTKVSDASGEAWFSAFSE
QAEKIIGCSADELDKLKSQQEGKANPFELKLKTATWVPHLFRVSVTTNEYNSEKRQRITV
RAVTPIDFAAESRFLLEDISKMKASQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgagtaagcccagatgcgatttctagcctactggcgaacccatctccggat
tcttcatcggaagtgccggaaatcgttgttcaagtcctcgatttgaagcctactggaagt
aaatacatgtttactgctagtgatgggaagatgaagctcaaagcattattgcaatctagt
ttgtcatcagaagtcctgtctggaaatattcagaacctgggtctcattcgcattcttgat
tatactgttaatgacattccaacaaagaacgagaagtttttaattgtcatcaagtgtgag
gttgtatctcctgctcttgaagcagaggtcaaatctgatgggacaattgaagaatctggg
attattctgaaaccaaaacaggaaatggatattaagagtgaggtgaaaagtgaagggctg
ggcatgattttgaagccaaagcaagaattgattgctaaatcagctgctcagatagttcat
gaacagaatggaaacatggcacctgctgcacggctggcaatgacgagaagagttcatcca
cttgtttccttgaatccttaccaaggaaactggactataaaggtccgagttacgagcaaa
ggaaacatgaggacatacaaaaatgctagaggagaaggctgtgttttcaatgtggagtta
tcagatgaagatggtacacaaatacaagcaacaatgtttaatgaagctgcaaggaagttc
tatgacaagtttcagttggggaaggtttattacatatcgaagggaacactaaaagttgct
aataagcagttcatgacagtacacaatgactatgaaatgaccttgaatgaaaattctgag
gtggaggaagcaagtaatgaagcaacttttatacctgaaacaaaattcaattttgtcccc
attgatcaattgggtccatacatcaattcaaaggaacttgttgatgttattggtgtggtt
caaaatgtatctcctacaatgagcattcgaagaaaaataaacaatgagactgtaccgaaa
cgtgatataactattgcagatgagacgaagaaaacagttgtggtgtctctatggaatgat
cttgcaacaaatgttggacaagaactgctggatatttctgacaagtctcctgtagttgca
attaaatccctcaaagttggagacttccaaggtatatctttatcagccttgagcaagagc
attgtagtagtaaatccagagacacccgaatcaaaaaagttgagatcctggtatgatgct
gaaggtaaagaaacttcaatggcttctgttggtgctggaatgagccctacaaccaacagt
ggagggagatctatgtactctgaccgtgtctcactttctcacataaccggcaacccgtcc
ttgggtgaggacaagcctgtattcttcagcataagagcctacattagcctcatcaagcct
gatcaatctatgtggtatcgtgcttgtaagacgtgcaacaagaaagttactgaagttatt
ggatctgggtattgttgtgaagtatgccaaaagtatgacagcgagtgtaatttaagatac
ataatggtaacaaaagtatccgatgcaagtggcgaagcttggttctcggcgttcagtgaa
caagcagagaaaattattgggtgctcagccgatgagctagataaactgaaatcccagcag
gagggaaaagcaaatcctttcgaattgaaactgaaaacagcaacatgggttcctcatctt
ttccgagtcagtgttacaacaaacgagtacaatagtgagaaacggcagaggataacggtc
agagcggttaccccaattgattttgcagctgagtccaggtttttgctggaggacatatcg
aagatgaaagcctctcaatag
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