Actinidia eriantha (wild kiwifruit): 130796326
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Entry
130796326 CDS
T09464
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130796326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130796326
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130796326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF3856
ATG17_like
PAXNEB
DUF2987
Motif
Other DBs
NCBI-GeneID:
130796326
NCBI-ProteinID:
XP_057514640
LinkDB
All DBs
Position
16:11129865..11142993
Genome browser
AA seq
942 aa
AA seq
DB search
MDVNLKEHNKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHDENAIFIATT
YYHTTTALRQLGSGSDAISSVSASRNMFETIARDLLLDRTDHTLELYEGSGSNWRLVKSG
SPGNLGSFEDILFANNEMQDSPVIVALSPNFRENGCTVGMGYVDLTKRVLGLAEFLDDSH
FTNVESSLVALGCKECLLPTDSAKSSECKPLHDALSRCGVMLTERKKTEFKGRDLVQDLG
RLVKGSIEPVRDLVSGFEFATGALGSLLSYSELLTDESNYGSYSIRQYSLHSYMRLDSAA
IRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVTEINSRLDLVQAF
VEDTALRQDLRQHLKRISDIERLVRYVDKRRASLQHIVKLYQSSIRLPYIRSALERYDGQ
FSSIIKQRYLDPLEDLTDDNHLNKFINLVEAAVDLDQLENGEYMISSAYDPKLCELKDGQ
ESLEQQIHNLHRQTANELDLAVDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTHFIVLE
TRKDGVKFTNTKLKKLGDQYQKILEEYKNCQKELVTRVVQTSATFSEIFESIAVLLSEMD
VLLSFSDLASSCPTPYTRPDITPSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLVRGKSW
FQIITGPNMGGKSTFIRQVGVSILMAQVGSFVPCDKACISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHENVNDDPSLKKIAGVANYHVSAHIDSSRRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVINLAREKAAELEDFSPVTVISNDAKEEVGSKRKRECDPEDTSRGAARAHQF
LKEFSELPLEKMDFKEALEQVRRLKNDLERDAVNSHWLQQFL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaatttgaaggaacataacaagcttcctgagcttaaactcgatgctaagcaa
gctcaaggatttctctcattcttcaaaaccctaccccgtgaccctagggctgttcggttc
tttgaccgccgggattattatactgctcacgatgagaatgcaattttcattgcaacgacg
tattatcatactactactgctttacgacaactgggtagtgggtctgatgctatttctagt
gtcagtgcaagtagaaacatgtttgagaccattgctcgtgatcttctcttggatagaaca
gaccatacccttgagctgtatgaagggagtgggtcaaattggagactagtgaaaagtggg
agtccaggaaatctaggcagttttgaagacattttgtttgccaacaatgagatgcaggat
tctcccgtgattgttgccctttcccccaatttccgtgaaaatgggtgcactgttgggatg
ggctatgttgatcttactaagagagtgcttggattggctgaatttttggatgatagccat
tttacaaatgttgagtcatcattagttgctcttggttgcaaggaatgccttttgcccacg
gacagtgctaaatctagcgaatgtaaacctttacatgacgcattgtcaagatgtggtgtg
atgctaacagagagaaagaaaactgaatttaagggaagagatttagtgcaggatcttggt
aggcttgtcaaaggttctattgaaccagttcgagatttggtgtctgggtttgaatttgca
actggggcactgggttcattgctgtcctattcagaattacttaccgatgagagcaattat
ggaagttatagtatccgacagtacagcctccacagctacatgagactagattctgctgca
ataagggctttgaatgtcatggaaagcaaaactgatgccaacaaaaattttagtttgttt
ggactgatgaatagaacctgtactgctgggatgggtaaaagattgctgcacatgtggcta
aaacagcctttattggatgtgactgaaatcaactcgaggttggatttggtacaagcattc
gtggaggatactgctcttcgccaggatctgaggcagcacttaaaaagaatttctgatatt
gaacgattggtgcgttatgttgacaagcgaagagctagcttacagcacattgtaaagctt
tatcagtccagcattagacttccatacatcagaagtgcattggaaaggtatgatggccaa
ttttcgtcaatcatcaagcaaagatatctggatccattggaggatttgactgatgataat
cacttaaataagttcattaatcttgtggaagccgctgtagaccttgatcaacttgagaat
ggggaatacatgatttcatctgcttatgacccaaaattatgtgaactgaaggacgggcaa
gaatcattggaacagcaaatacataatttgcatagacaaactgctaacgagcttgacttg
gctgttgataaggctcttaagttagataagggaacacaatttggccatgtttttcgaatt
acaaagaaggaagaaccgaaaattaggaaaaagctcaatactcatttcattgttcttgaa
actcgcaaggacggggtgaagtttacaaatacaaagcttaagaagttaggggatcagtac
cagaagatacttgaggagtacaagaattgtcaaaaagagttggtcactcgtgtagttcaa
acttctgcaactttctccgagatctttgagtctatagctgtgttgctttctgaaatggat
gtcttgcttagtttttccgatctagcttctagttgccccactccctacacaaggccagac
ataaccccttcggatgcgggagatattgtattagaaggaagtagacatccttgtgtggag
gcacaagattgggtgaattttataccaaacgattgtagactggttaggggaaaaagttgg
ttccagattatcacaggacctaacatgggtggaaaatcaacattcattagacaggttgga
gtgagcatcctgatggcgcaagttggttcttttgttccttgtgacaaagcctgcatttct
gttcgtgattgcatctttgctcgtgtgggtgccggggactgccagcttcgtggggtttct
accttcatgcaagaaatgctggagactgcttcaattctgaaaggagctactgacaagtca
ctgataatcatcgatgaattgggccgtggaacatcaacatatgatggattcggtttggct
tgggcaatctgcgagcaccttgttgaagtcattaaagcacctactttgtttgcaacccat
tttcatgaactgactgcattagctcatgagaatgtcaatgacgacccttctttgaagaaa
attgctggtgtggcaaattatcatgtcagtgcacacattgactcgtcccgtcgcaagcta
actatgctttacaaggttgagccaggggcttgtgatcaaagttttggcattcacgttgct
gaattcgcaaacttccccgaaagtgtcatcaatcttgccagagaaaaggctgcagagttg
gaagatttctcacctgtcactgtcatttcaaacgatgctaaagaagaggtgggatctaaa
cggaagagagagtgtgacccggaagatacatctagaggtgctgctcgggctcaccagttc
ttgaaggagttctctgaattgccgctagaaaagatggacttcaaggaggctttggaacaa
gtgcgtaggttgaagaatgacttggagagggatgctgtgaattctcactggcttcagcaa
ttcctttag
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