Actinidia eriantha (wild kiwifruit): 130796328
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Entry
130796328 CDS
T09464
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130796328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130796328
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130796328
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130796328
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
130796328
NCBI-ProteinID:
XP_057514641
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Position
16:complement(3708708..3709996)
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AA seq
274 aa
AA seq
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MSLLPKSDAIEIREVWAENLEEEFALIRDVVEEFPFIAMDTEFPGIVLRPVGNFKNSNDY
HYQTLKDNVDLLKLIQLGLTFSDEQGNLPTFGTDKYFIWQFNFREFNINEDVFANDSIEL
LRQSGIDFKKNNEKGIDAQRFGELLMSSGVVLNDGVCWVTFHSGYDFGYLLKLLTCQNLP
DTQVEFFTLINVYFPVMYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLKDNFFSGSLEKYAGVLYGLGVENGQNTH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgcccaaaagcgatgcgattgaaattcgagaggtttgggcggaaaatttg
gaggaggagtttgctttgattcgcgatgttgtcgaagagtttccgtttattgcgatggat
acggagtttccggggattgttcttcgtccggtgggcaatttcaagaacagtaacgattac
cattaccagacattgaaagacaacgtggacttgctaaaattgattcaattagggcttacc
ttttcggacgagcaagggaatttgcccacctttggcacggacaagtacttcatttggcag
ttcaatttccgcgagttcaacataaacgaggacgttttcgcgaatgactcgatcgagctc
ttgcgccagagtgggattgatttcaagaagaacaatgagaagggtattgatgcgcagcga
tttggagagcttctgatgtcgtctggggttgttctgaatgacggtgtttgttgggttact
ttccacagtgggtatgatttcgggtatttgctcaagctattaacttgtcagaatttgccc
gatacccaagttgagttttttactctgatcaacgtgtacttccctgtcatgtacgacatc
aagcatcttatgaagttctgcaatagccttcacggtggattgaacaagctcgcagaattg
ttggaagttgagagagttggtgtttgccatcaggcgggttcggatagtttgctcacagct
tgtacattcaggaagttgaaagataatttctttagcggctcgcttgagaagtatgccggt
gtcttgtatggcctaggtgttgaaaatggacagaatactcattga
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