Actinidia eriantha (wild kiwifruit): 130796346
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Entry
130796346 CDS
T09464
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130796346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130796346
03036 Chromosome and associated proteins [BR:
aew03036
]
130796346
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130796346
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130796346
PBAF complex
130796346
GBAF(ncBAF) complex
130796346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Flot
Motif
Other DBs
NCBI-GeneID:
130796346
NCBI-ProteinID:
XP_057514665
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All DBs
Position
16:4679955..4685569
Genome browser
AA seq
564 aa
AA seq
DB search
METPSQDPSLKPPLPADVPQLDLYTIPSHSSWFSWDDIHDTEKSHLREFFDGSSFTRSPK
IYRDYRDFIISKFREDPSRRLTFTEVRKSLVGDISVLHKVFAFLERWGLINFCAPGGEDP
GEEGNWRVRVEDGAPNGVRVVAAPNSLKPVTVPPGGSDNGRGVVGNGFDLPPLASYRDVY
SERKGTICGNCKQRCESGHYECTKEGSFIICVKCFKNGHYGENKSVNDFKFIDCILNSGN
HEAVWTEAETLLLLESVLKHGDNWDLVAENVKTKTKADCISKLIELPFGDLMLGSTHRRG
RLWDNDGNMSIVQQVQLPSSETHSQENINTEDQCHDVEKESNQNGDAETQVPPLKRKRTI
SPSDTGNALMKQVALISSMVGPHITASAAEAAVTALCDECQFPREIFDGDANEGEELGSS
PQNNKKERPLEVDGSEIEERPTELESQGTSSEKNAIPLTFRIRAATATAIGAAAARAKLL
ADQEDRKIECLAATIIETQLKKLQCKIKHIDDMELIMEKEYTQLEELKESIIAEQMNVLQ
RVFSTGISRWKDHTSVKPHVDSVL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccatcacaggacccaagtttaaaacccccacttcccgccgacgtaccccag
ctcgacctctacaccatccccagccactccagctggttctcctgggacgacatccacgac
accgagaaatcccacctccgagagttcttcgacgggagctccttcactagatcgcccaaa
atctacagagactacagagacttcatcatctccaagttcagggaagacccttcgcgaagg
ctcactttcacggaggttcgcaaatcgctggtcggcgacatcagtgtgctccacaaggtg
ttcgcgttcttggagcggtgggggttgatcaatttctgtgcacccggaggtgaggatccg
ggggaagaggggaattggagggttagggttgaggatggggcaccgaatggggttcgggtc
gtggcggctccgaattcgttgaagcctgttactgtgcctcctggtgggagtgataatggc
cgtggagtggtggggaatggattcgatttgcctccgctggcgtcttatagagatgtttac
agcgagcggaaggggaccatctgtggaaattgcaaacagcgatgtgaatctgggcattat
gaatgcacaaaggagggaagtttcataatttgtgtaaagtgctttaagaatggacattac
ggggagaacaagtctgtgaatgacttcaagttcattgactgcattctgaacagtgggaat
catgaagctgtttggactgaagcagaaactctgctacttctagaatctgtcttgaagcat
ggagacaactgggatcttgttgctgaaaatgttaaaactaagactaaagcggattgtatt
tcaaagcttatagaacttcctttcggtgaccttatgttgggatccacccacagaagaggt
aggttgtgggataatgatggcaacatgagcattgtccaacaagtacaattaccttcatct
gagactcattctcaagagaatatcaacacagaggatcaatgtcatgatgttgaaaaggag
agcaaccagaatggagatgctgagacccaagttcctccattaaagagaaaacgcactatt
tcaccttcagacacaggcaatgcactgatgaaacaggtagctctcatctcttccatggtt
ggcccacatatcacagcttctgctgctgaggctgctgttacggctctttgtgatgaatgt
caatttccaagagagatatttgacggtgatgctaatgaaggcgaggagttgggatcttcc
ccacaaaataacaagaaagaaagaccccttgaggttgatggttcagagattgaagaaaga
cccaccgaattagaatctcagggaacatcctctgaaaagaatgctatacctctaactttt
cgaataagagctgcaacagcaacagctattggtgctgctgctgctcgtgcgaagttattg
gcagatcaagaagacagaaaaatagaatgtctagcggcaaccattatcgaaacacagttg
aagaagttgcaatgcaaaatcaagcatattgatgatatggagctgataatggagaaggaa
tacacccaactggaggaactgaaagagtcaatcatagcagagcagatgaatgttttacaa
agagtattcagtaccgggatatctagatggaaggatcatacttctgtaaaacctcatgtg
gatagtgttctttga
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