Actinidia eriantha (wild kiwifruit): 130796410
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Entry
130796410 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130796410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130796410
03009 Ribosome biogenesis [BR:
aew03009
]
130796410
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130796410
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130796410
Complex B
130796410
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
Helicases
130796410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130796410
NCBI-ProteinID:
XP_057514747
LinkDB
All DBs
Position
16:6044953..6051744
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AA seq
724 aa
AA seq
DB search
MMNHFDQRYGDPQSYRPRRSDLMGPQPPAVPPMMGGGIGGAVPTYSHGGAAPYGGPVVPY
ASSGREAGGGAGSAPGVGGFNGYPPFQPDVGRGFDIGRSGGGGGGGGGGRGYSDGRGGRG
RGGGGRGGDLGGRMANGGVGNRRGGDGGFGGGGRGREGGRGGGGGGRGFDSSRGGGRAGG
GRGVGGSSDGGRGGVRNFGGGRAGGRGSDAAWGGGRSFGGGRGMGFDGGRGGGRGGGRQG
GSKGDLDNIALPKQDFGNLVPFEKNFYIECPSVRAMSEQDVMLYRSRREITVEGQDIPRP
IRIFEEANFPDYCLEVIARLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPA
FVHVIAQPRLVHGEGPIVLVLAPTRELAVQIQEEALKFGSHTNIRSTCIYGGAPKGPQIR
DLQRGVEIVIATPGRLIDMLEAQNTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPD
RQTLYWSATWPREVETLARQFLRNPYKVIIGSPDLKANQSINQVVEVVTEVEKYNRLIRL
LKEAMDGSRILIFMETKKGCDHVTRQLRMDGWPALSIHGDKNQSERDWVLAEFKSGRSPI
MTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGIAVSFFTHANAKFAR
DLIKILQEAGQIVPPPLSNMARSAGSSLGASGGNFRSRGRGGFGNRSLISGSNTIPLGGS
QRHW
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccattttgaccagagatatggcgacccccaatcctaccgccctcgtcgaagt
gacctaatggggccgcagccgccggctgttccgcctatgatgggcggtggaataggtggg
gcggtacccacctacagccacggcggtgctgctccgtatggtggccctgtggtgccttac
gcttccagcggaagagaggcaggcggtggtgcaggatctgcacctggtgttggtggtttt
aatgggtacccgccttttcagcctgatgttggaagagggtttgacatcggccgcagtggt
ggtggaggaggaggaggaggtgggggaaggggatatagtgatgggagaggagggagggga
aggggtggtggtgggagaggtggtgatcttggtggacgaatggccaatggtggagtgggg
aacaggagaggaggtgatggaggttttggcggtggtggaaggggtcgtgagggtggacga
ggtggtggtggtggcgggaggggatttgattctagtcgtgggggaggtagggctggtggt
ggccgtggggttggtgggagttctgatggaggtagaggtggagttagaaattttggtgga
ggtagagccggtggtaggggttctgatgctgcctggggtggcggtaggagtttcggtggc
gggcgcggaatggggttcgatggaggccgtggtggtggcagaggtggtggtagacaagga
ggatcaaaaggggacttggataatattgctcttccgaagcaagattttggtaacttggtt
ccttttgagaagaacttttacattgagtgtccttctgtgagagcaatgtctgagcaagat
gttatgctttaccgttcaagacgtgaaatcaccgttgaaggccaggacatcccgaggcca
attcggatttttgaggaggcaaattttcctgattattgccttgaggttatcgccagattg
ggctttgttgagccaacaccaattcagtctcaaggatggccaatggccttgaagggaagg
gatttaattggcattgctgagacaggttctgggaagactttggcatatctgttacctgct
tttgttcatgttattgcacagcctcgattggtacacggcgaaggtcccattgtcctggtt
ttagcacctactagagaattggctgttcaaattcaggaagaagctttgaaatttgggtca
catacaaatattagaagtacctgcatctacggtggtgccccaaaaggaccacagattcgt
gatcttcaacgaggtgttgaaattgttattgccacacccggtcggctcattgatatgtta
gaagctcaaaacacaaacttgaaaagagtgacttaccttgtgttggatgaggctgatcga
atgttggacatgggttttgagcctcagatcaggaaaattgttgcccagatccgacctgat
agacagacattgtattggagtgcaacatggccacgggaggtggaaactctggcaagacag
tttttacgcaacccatataaggtaattattggctccccagatcttaaggcaaaccaatct
attaaccaagttgtggaagttgtaacagaggtggagaagtacaacaggctgatcagactg
ctcaaggaagcaatggatggaagtcgaatactgattttcatggagacaaaaaaaggatgt
gaccatgtcactagacaattgagaatggatggatggccagctttatccatccatggtgat
aaaaaccagtccgaaagagattgggtcctggctgagttcaaaagtggcaggagtcctata
atgacagccactgatgttgctgcacgtggtcttgatgtgaaagacataaaatgtgtgatc
aattatgatttcccgtcaagcctggaggattatgtccataggattggccgaacaggtcgt
gcaggagctaagggaattgctgtttcatttttcacacatgcaaatgctaagtttgctcga
gatctcattaagatcctgcaagaagcagggcaaatagttcctcctccattgtctaacatg
gctcgttcagctggttcgagtctaggagcttctggtggcaacttccgctccagaggacga
ggtggctttggcaacaggagtttgatttcaggttctaacactattcctcttggtggttcc
cagaggcattggtag
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