Asticcacaulis excentricus: Astex_0082
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Entry
Astex_0082 CDS
T01378
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aex
Asticcacaulis excentricus
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_0082
Enzymes [BR:
aex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Astex_0082
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Astex_0082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
TetR_C_14
Motif
Other DBs
NCBI-ProteinID:
ADU11784
UniProt:
E8RNF3
LinkDB
All DBs
Position
1:89783..92803
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AA seq
1006 aa
AA seq
DB search
MKSRDLFVTPAPRWYSIPSGRPFLDDLARGLCEALGDDLPHALILTPTRRGARQMAHAFT
DQCRAKALLLPQVRALGDLEEGEPPFDLEHLGLDLPPALSSTRRRFELAKLIKAHYESDV
PLNARTALELADSLAKFFDSLALEEVEASDRLDRLVHDPDLLHDDMGAMAEHWQVSARFL
AIAVDLWPKRLAELDLMDPSQRLVTLIHRLGKQWEKTPPTHPVIIAGTTGTTPATARLMG
LASRFEQGAVVLPGLDLSLAEDVWAQVGDSHPQGAMKALLDRHRVSREVVNTWPVSIEAD
RARHARRRVLNEALRPAEATKDWRTQIAALKAGSEAAIKDGLSGLTHIEGRNDEEVAAVI
ALLMREALETPGKTAALVTPDITLSRRVTARLSRWGVRPDSSAGDALIHSLVGRFLHSLL
DLILEPFDAVKLLALLKHPLSRFADDRHVNILEIIGLRGAKPRNAEEVLSRLTQKEAFEA
ADLWQDYMDTCLIWQRQKTDLSDYVRTLTVWAESVAARDGQALWSGAAGATASALLADLI
AEGRDFLVEDDQVFVDILRRALRTATVRTGGHTHPRLTILGAIEARMFSADRLILAGLEE
GVWPQAAEIDPFLSRPMRKVLGLPSPERRTGLSAHDFVQGASQPEVWMVTRQRREGEPQV
QSRWLWRLQTLTTGAGEHLPTKAQWLDWARRMDGPLSVVPDALKPASRPQPAPPVEARPL
QLPVTQIETLERDPYAVYGRYVLGLKPLDRPNEPFEALRRGTAIHAVAEKFAADDMPMGE
AGVRVFCDMLEAQLRAENLSEAQLALQRPLFPLLAREYVAFEAERRADHPRLLIEQSGKL
TIDLPRGTFTVTAKADRVEIHERGVDVIDFKTGQPPSPKAVIAGFYPQLTLTAAILKYGS
FNGFEDFHRAKGLHELVYVRLGQDVVKPRVVYDKKNPLSADEMADRALSRLKTRLMQYEN
PKQGYLSWRAPQYRMERGGDYDQLARLYEWHVLGDREAEAATEEGE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccgcgatctcttcgtcacgccggccccgcgctggtactctattccctccggg
cggcccttccttgacgatctggcgcgcggtctgtgtgaggcgctgggtgacgacctgccg
cacgccctgatccttacccccacacggcgtggcgcgcgtcagatggcgcatgcctttaca
gatcagtgccgggcaaaggcgctgcttttgccgcaggtgcgcgccctgggggatctcgaa
gaaggtgaaccgccatttgatcttgagcatctgggtctagacctaccacccgccctatcc
tcgacgcggcggcgtttcgagctggcgaagctgatcaaggcacattacgaaagcgatgtg
ccgcttaatgcgcgaacggcgctggaactggctgattctcttgccaaatttttcgattcc
ttagctctggaagaagtcgaagcctcggatagactggaccgtcttgtccacgaccccgac
cttctgcacgacgatatgggcgctatggccgaacactggcaggtatcggcacgttttctg
gccatcgccgtggatctgtggccaaagcggctggccgaactcgacctgatggaccccagc
cagaggctggtgacgctcatccatcgcctcggaaagcagtgggaaaagaccccgcccacc
catccggtcattatagccgggaccaccggcaccacacccgctacagcacgactgatgggg
ctggcctcgcgttttgagcaaggggccgtcgtcctgcccggtcttgacctgtcgctggct
gaagacgtctgggcgcaggtcggcgattcgcacccgcaaggggccatgaaggcccttctt
gatcgccaccgcgtcagccgcgaggtcgttaacacctggcccgtctccatcgaggcggat
cgcgcgcgtcacgcccgccggcgcgtcctcaacgaagccctgcgccccgccgaagccacc
aaggactggcgaacccagattgcggcgctgaaggccggatcggaagccgctataaaggac
ggcttaagcggcctcacccatatcgaaggccgaaatgacgaggaagtcgccgccgtcatc
gctcttttgatgcgcgaagcgctggaaacgccgggcaagacggccgccctggttacgccg
gacatcaccctgtcgcgacgcgtaacggcccgtctgtcgcgctggggcgtgcgccccgac
tcgtcagcaggtgacgccctgatccacagcttggtcgggcgcttcctgcatagccttctg
gatctgattctggagccgttcgatgcggtgaagcttctggctttgctgaaacatcctctg
tctcgcttcgctgacgatcgccatgtaaatatattagaaatcataggcttacgaggtgca
aagccccgcaatgcggaggaggttctgagccgcctgacgcagaaagaggcctttgaagcc
gctgacctgtggcaggactatatggacacctgcttgatttggcagaggcaaaagacagac
ctgtccgattacgtgcgtaccctgacggtctgggccgaatccgtggccgcacgtgacggg
caggccctgtggagcggcgcggcgggagcgacggcttcggcgcttctggccgatctaatc
gccgaaggccgggatttcctcgtcgaggacgatcaggtgtttgtcgatattctgcgtcgg
gcgctgcgcacggcaactgtgcgcaccggcgggcacacccatccgcgtctgaccatattg
ggagctatcgaagcacgcatgttttcggctgaccgtctgatactggccggtctggaagaa
ggggtgtggccgcaggctgccgaaatcgaccccttcttgtcgcgccctatgcgcaaggtg
ctgggcctgccttcgcccgaacgccgcaccggtctgtcggcacacgattttgtgcaaggc
gccagtcagccggaggtgtggatggtgacgcgccagcgccgcgaaggcgagcctcaggtg
cagtcgcgctggctgtggcgccttcaaaccctgaccaccggggcaggcgaacacctgcct
acgaaagcccaatggcttgattgggcgcggcgcatggacggccccttgagcgtcgtgcct
gacgcccttaagcccgcctcaaggccccagcctgcgcctcccgtcgaggcgcgaccgcta
caactaccggtcacgcagatcgaaacgctggagcgcgatccctatgccgtctatgggcgc
tatgtgctgggcctaaaaccccttgaccggccgaacgagcccttcgaggccctgcgtcgc
gggacggccatacatgccgtcgcggaaaaatttgcggcggacgatatgccaatgggcgag
gccggggtacgggtcttctgcgatatgctggaggcgcagttgcgtgctgaaaacctcagc
gaggcgcaactggccctgcaacgccccctgtttccactgctggcgcgtgaatatgtagcg
tttgaggccgagcgtcgcgctgaccacccgcgcctgctgatcgaacagtccggcaagctg
actatcgacctgccgcgcggcaccttcactgtgaccgccaaggcggatcgtgtggaaatt
catgagcgcggcgtcgatgtgatcgacttcaagaccggtcagccaccctcgcccaaggcc
gtgatcgccggcttctacccgcagctcacgctgaccgctgccatcctcaaatacggcagc
ttcaacgggtttgaggacttccaccgcgccaaagggcttcatgagctggtctatgtgcgc
ctgggacaggatgtcgtcaaaccgcgcgtggtttacgacaaaaagaacccgttgagcgcc
gatgagatggctgatcgcgcgctgagccgccttaaaacacgcctgatgcagtacgaaaat
cccaaacagggctacctgtcctggcgcgcgccgcaataccggatggagcgcggtggtgac
tacgatcagctggcgcggctttatgaatggcacgttctgggtgaccgcgaggcggaagcc
gcaacggaggagggcgaatga
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