Asticcacaulis excentricus: Astex_0417
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Entry
Astex_0417 CDS
T01378
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aex
Asticcacaulis excentricus
Pathway
aex03030
DNA replication
aex03430
Mismatch repair
aex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Astex_0417
03430 Mismatch repair
Astex_0417
03440 Homologous recombination
Astex_0417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aex03032
]
Astex_0417
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_0417
Enzymes [BR:
aex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Astex_0417
DNA replication proteins [BR:
aex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Astex_0417
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Astex_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
TPR_7
Motif
Other DBs
NCBI-ProteinID:
ADU12112
UniProt:
E8RQ55
LinkDB
All DBs
Position
1:complement(435186..437339)
Genome browser
AA seq
717 aa
AA seq
DB search
MSRFPALPPTYYHAHFSEMLAFVREVYASVLGETEHTFITDFAGLSLEAQCLFIRMSNRK
RPVFTAADLVYTEIGEIEWRLEELAEAGFARRASAEDYRSWLDTLTRPVLEQMARENDIA
LARQWSKAQVARAVEANLPFEDFAASFSHTTWVPGHRETVGFLLYLYFGKLSDNLTAFTL
RDLGVVSVRGQTAYQARFVSREEALGGHAYTQALRSLKGAAPEDYQRLAERADTLPAPAT
PFVDGLRDRLMHDLGRFFERQKDTDQAIGFYAQSGLFESQERTIRLLHGRGETERVLGLL
ESMLDSPAHDEAFLFADDFYRRKFGKKRTSAFTDLLREGEEIGADDLYRSLPELAAIRHY
ETKGWTAHHVENGLWPALFGLLFWNELFEQPGSLASEFDWMPQALKDNRFATLFPLVVEE
RLAALETGVGWPLIADTLNRREGRENGIFGWWPGLEKLLHDFLCAAPPKAVRDTVAALCA
DFQGLRDGFPDLLLIGPCGVRFIEVKGEGDQVRRHQLARLNLLRQAGFEAGILRVTFHPD
PDQVYTVVDIETTGGQSANERVTEIGAVKIRNGEIIDTWQSLINPERRIPPFITELTGIS
NAMVRDAPRFADIADDFDAFLKGTVFVAHNVNFDYGFLSAEYRRLERPFRYPKMCTVASM
RRHFPGLAAYGLGPLSREFGIELKNHHRALSDAMAAAELLKLINERRLSPIRDWDAR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgttttcctgccctgccgccgacctattaccacgcacacttcagcgagatgctg
gcctttgtgcgcgaggtctatgccagcgtactgggtgagaccgagcataccttcattaca
gactttgcgggtctgagccttgaagcccagtgcctgtttattcgcatgtcgaaccgcaaa
cgtccggtgtttacggccgctgatctcgtctataccgagatcggcgagatcgagtggcgg
ctggaggaactggccgaagccgggttcgcgcgccgcgcctctgccgaagattacaggtca
tggctcgataccctgacacggcccgtgctggagcagatggcgcgcgaaaacgacatcgcc
ctagcgcgccagtggtcgaaggcgcaggtggcgcgggcagtcgaagcgaacctgccgttc
gaggatttcgccgccagtttttcgcacaccacctgggtgccggggcatcgggagacagtg
ggcttcctgctctacctctattttggcaagctgagcgacaatctgacggcctttacccta
cgggatctgggcgtcgtctcggtgcgcggtcagacggcctatcaggcgcgcttcgtcagc
cgcgaggaggcattgggcggccatgcctatacgcaggcgctacggtccttgaagggggcg
gcgccagaggactatcagcgactggcggagcgtgccgacactcttcccgcccccgccacg
ccgtttgttgacggtctgcgcgaccggctgatgcacgatctggggcgctttttcgagcgg
cagaaggacacggatcaggccatcggtttttacgcacaatcgggcctgttcgagagtcag
gaacgcaccatccgactgttgcacgggcggggcgagacagagcgcgtgctgggcctgctg
gagtccatgctcgactccccggcgcacgatgaggcctttctgttcgccgacgacttctac
cgtcgcaagttcggcaagaaacgcacgagtgcgtttaccgacctgctgcgcgagggcgaa
gagatcggcgccgatgacctctatcgcagcctgccggaactggcggccatccgccattac
gagacaaagggctggacggcacaccacgttgaaaacggcctgtggccagccctgtttggc
ctgctattctggaacgaactgtttgagcagccggggtcgctggcctcggaattcgactgg
atgccgcaggcgctgaaagacaatcgcttcgccaccttgttcccgttggtcgttgaagag
cgtctggccgcattggaaacgggcgtcggctggcccctgatcgccgacaccctcaaccgc
cgcgaaggtcgtgagaacggtatcttcggctggtggccgggtttagagaagctgctgcat
gactttctatgcgccgccccgccgaaggccgtgcgcgacacagtggcggccctgtgcgcc
gattttcaaggcttgcgcgacggctttccagacctgctgctcatcggtccgtgtggcgtc
agattcatcgaggtcaaaggcgaaggcgatcaggttcgcaggcaccagctggcacggctc
aacctactgcgacaggcgggatttgaggcgggcatattgcgcgttaccttccaccccgac
ccggatcaggtctatacggtggtcgatatcgagaccaccggcgggcagtcggccaatgag
cgcgtgaccgagatcggcgcagtgaagatccgcaatggcgagatcatcgacacctggcaa
agcttgatcaatcccgaacgccgcattccgccctttatcaccgaactgaccggcatcagc
aacgcaatggtcagggacgccccccgctttgccgacatcgccgacgatttcgatgcattt
ctgaaagggacggtcttcgtcgcccacaatgtcaatttcgactacggtttcctgtcggca
gagtaccggcggctagaacggcccttccgttatcccaaaatgtgtaccgtggcgtcgatg
cgccggcactttccggggctggcggcctacggactagggccgttgtcgcgtgaatttggc
attgagttgaaaaatcaccaccgcgccctgtcggacgcgatggcagcagcggagttgctg
aaactgatcaatgagcgccgactgagccctattcgcgactgggacgcccgatag
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