Asticcacaulis excentricus: Astex_0671
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Entry
Astex_0671 CDS
T01378
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
aex
Asticcacaulis excentricus
Pathway
aex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Astex_0671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_0671
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Astex_0671
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Astex_0671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Kinesin
Microtub_bd
DUF87
SWI2_SNF2
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ADU12357
UniProt:
E8RRN6
LinkDB
All DBs
Position
1:712955..715126
Genome browser
AA seq
723 aa
AA seq
DB search
MNRSHLARLIFEDVRCHAADVGAQDFPPALWSPHRPDRPQKSEGGRRFVLHSAYEPAGDQ
PAAIAELVEGANAAERDQVLLGVTGSGKTFTMAKVIEQTQRPALILAHNKTLAAQLYSEF
KAFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHAATRAILERDDVI
VVASVSCIYGIGSVETYTAMTFELKVGQTIDEAQLRADLVALQYKRNDAAFERGTFRRRG
DVIEIFPAHYEDRAWRVSLFGDEIEALTEFDPLTGKKTADLKDLKVYAASHYVTPRPTLR
QAIDRIKAELKLRLDQLHAEGKLLEAQRLEQRTTFDLEMMEATGACAGIENYSRYLTGRA
PGEPPPTFFEYLPENALLFVDESHVTVPQIGGMYRGDFARKSVLAEYGFRLPSCMDNRPL
KFEEWEAMRPQTVHVSATPGNWEMEQTGGVFTEQVIRPTGLIDPPVEIRPVSTGGANQVD
DVIAEVREVAKNGYRSLVTVLTKKMAENLTEYMHEQGIRVRYMHSDIDTLERIEIIRDLR
LGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVEGRVILY
ADKMTGSMERALAETSRRREKQMAYNAEHGITPESVKRGISDILDSPYEKADRVQVPVGV
AAKDSKPFLGSNFQATLKDLETRMREAAGNLEFEEAARMRDEIKRLKLLDLEFAKDMIGD
PAT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttctcatctcgctcgcctcattttcgaagatgttcgctgtcacgccgccgat
gtcggcgcgcaggacttcccgcccgctctgtggtcgccgcaccgccccgaccggccgcaa
aagtcggagggcgggcggcgtttcgtgctgcattcggcctatgaaccggctggggaccag
ccagcggccattgcggagctggtcgaaggggcaaatgcagcagagcgtgaccaggtgctt
ctcggcgtcaccgggtcgggcaagaccttcaccatggccaaggtgatcgagcagacgcag
cgaccggcgttgattctggcgcataacaagacgctggcggcgcagctttatagtgagttc
aaggccttctttccggaaaacgcggttgagtattttgtctcctactacgactactaccaa
cccgaagcctacgtgccgcgtacggatacttatatagagaaggactcgtcgatcaacgaa
cagatcgaccgtatgcgccacgcagcgacgcgcgccatccttgagcgcgatgacgtaatc
gtggtggcgtcggtgtcgtgcatctacggtatcggttcggtcgaaacctatacggcgatg
acctttgaactgaaagtggggcagaccatcgacgaggcgcagttacgcgcagatctggtg
gcgctgcaatacaaacgcaatgacgcggcctttgagcgagggactttccgccgccgcggt
gacgtcatcgaaatcttcccggcccactacgaagaccgcgcttggcgggtgtccttgttt
ggggatgagatagaggccttgacggagttcgacccgctgaccggcaagaagacagcggac
ctaaaagacctcaaagtctatgccgccagccactatgtgacgccgcgcccgacgctacgt
caggcgatcgaccgcatcaaggcggaactgaaactgcggctggatcagcttcatgccgag
ggtaaactgctagaggcgcaacgccttgagcagcggaccacttttgaccttgagatgatg
gaagccacaggggcctgtgcgggtatcgaaaactattcgcgctatctgaccggacgggca
ccgggtgagccgccgccaaccttctttgaatacctgccggaaaatgctttgctgtttgtc
gatgaaagccacgtcaccgtgccgcagatcggcggcatgtatcgcggagactttgcacga
aagtctgttctggctgaatatggcttccgcctgccgtcttgtatggataaccgcccgctc
aagtttgaggagtgggaggcaatgcggcctcagaccgtccacgtttcggccacgccgggc
aattgggagatggaacaaacgggcggcgtgtttaccgaacaggtaatccgcccgaccggc
ctgatcgacccgccggtcgaaatccgccctgtttcgaccggtggtgccaatcaggtcgat
gacgtgattgctgaggtgcgcgaagtcgcgaagaacggttatcgctctttggtcacggtg
ctgaccaagaagatggcggaaaacctgaccgaatatatgcacgaacagggtatccgcgtg
cgttacatgcactctgatatcgacacgcttgagcgtatcgaaattatccgcgacctgcgc
cttggcgcgtttgatgtcctagttgggatcaacctgctgcgcgaaggcctcgacatcccc
gaatgtggctttgtggccatactcgatgccgacaaagagggcttcctgcgctcggagacc
tcgctcattcagaccatcgggcgggcggcgcgtaacgtcgaaggccgtgtcattctttat
gctgacaagatgacggggtcgatggaacgggcgctggccgaaaccagccgccgccgtgaa
aagcagatggcctacaatgccgaacacggcatcacgccggaaagcgttaagcgcggtatt
tccgatattctggatagtccttacgaaaaggctgacagggtacaggtgccagtgggcgtg
gcggcaaaggactccaaacccttcctgggttccaattttcaggcgacgctcaaggacctg
gagacgcgcatgcgcgaggcggcgggcaatctggagttcgaagaagcggctcgcatgcgc
gacgaaatcaagcgtcttaagctgctcgatctggagttcgccaaggacatgattggggac
cctgcgacataa
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