Asticcacaulis excentricus: Astex_0969
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Entry
Astex_0969 CDS
T01378
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aex
Asticcacaulis excentricus
Pathway
aex03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Astex_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aex03021
]
Astex_0969
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_0969
Enzymes [BR:
aex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Astex_0969
Transcription machinery [BR:
aex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Astex_0969
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Astex_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
ADU12650
UniProt:
E8RLN3
LinkDB
All DBs
Position
1:1013358..1014374
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AA seq
338 aa
AA seq
DB search
MIERNWQQLIRPEKPQIESGQDSQRKMRLVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
AVQIDGVVHEFSSIEGVREDVVDIILNIKQLALRMHAEGPKRMVLRASSAGPVTAGMIDV
PSDIEVLNPDHVICTLDEGASVRMEFTVQTGKGYVPADRLRPEDAPIGLIAVDALYSPVK
KVAYRVEPTRQGQSLDYDKLVLDVETNAAVTPVDAVAYAARILQDQLQIFITFEEPKPAI
VEEGKPELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTESEMLRTPNFGRKS
LNEIKEVLQSMGLSLGMDVPNWPPENVEDLAKKFEDQI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaagaaactggcagcagcttattcgtcccgagaagccccaaatcgagtccggt
caggattcccagcgcaagatgcgtcttgttgcggaacccctggaacgcggctttggcgtg
acgctcggtaatgctctgcgccgcgtgctcctgtcctccctgcaaggggcggcggtgaca
gcggtacaaatcgacggcgttgttcacgaattttcctcaattgagggtgttcgtgaggac
gtggtcgatatcatcctcaatatcaaacaactggcgctgcgtatgcacgccgaaggcccc
aagcgcatggttctgcgtgcgtcgtcggctggcccggtgaccgctggcatgatcgacgtc
ccgtcggacatcgaagtgctgaaccccgaccacgtcatttgtacgctggacgaaggtgct
tcggtgcgtatggagttcacggttcagaccggtaagggctatgtccccgccgaccgtctg
cgcccggaagatgcgccgatcggcctgattgccgttgacgctctctactcgccggtcaag
aaggtggcttatcgggtcgagccgacccgtcagggtcagtcgctcgattacgacaagctg
gttctcgacgttgaaaccaatgcggcggtgacgccggtggacgcggtggcttatgccgcg
cgcatccttcaggatcaacttcagatcttcatcacttttgaagagccgaagccggccatc
gtcgaagaaggcaagcctgagctaccgttcaacccggccctcctcaagaaagtcgatgaa
ctggagctcagcgtccgttcggcgaactgcctgaagaacgacaacattgtctatatcggc
gacctgatccagaagacggaatcggaaatgctccgtactcccaacttcggccgcaagtca
ctaaacgaaatcaaggaagtcctgcaatcgatggggctgtcgctcggcatggatgtgccg
aactggccgcctgagaatgtcgaggacctcgccaagaagttcgaagaccagatctaa
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