Asticcacaulis excentricus: Astex_2353
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Entry
Astex_2353 CDS
T01378
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aex
Asticcacaulis excentricus
Pathway
aex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Astex_2353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aex03021
]
Astex_2353
Transcription machinery [BR:
aex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Astex_2353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
ADU14006
UniProt:
E8RNA7
LinkDB
All DBs
Position
1:2555191..2557281
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AA seq
696 aa
AA seq
DB search
MSTATDKPEADTPSDGPLLDLTDAGVKKFIKNAKARGYVTMDELNKVLPSEEFTSEQIED
TLAMLTEMGVNVVDSEEEATEGGEIAVREETGGVVVAEKTSAYDRTDDPVRMYLREMGSV
ELLSREGEIAIAKRIEAGRDTMIRGLCESALTFEAIMIWREELESGRILLREIIDLEGTY
GGGPSEGPPPGALDDEAEEEDADAPIAMRAPEPVVKAPELKPEPKPEPQPEAKKPEPKKK
ADGGDEDEDDYVPMDEEEKKPQPEEEEEDDFDDGAGPSVSAMESELREGVMSTLDAIAGE
FETYRGLQERILGARLEGLPVDPADKVAYDEVTSAITRHLKTLKLNNQRIEALVEQLYTI
NKRLMSLEGRLLRLADSYGISRQEFLQNYYHRELDPQWTDKVRALGVRWQKFADNEAGSI
GRIRADIIQLATDMGVAVDDYRRIVQTVQKGEREARQAKTEMVEANLRLVISIAKKYTNR
GLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI
ETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDS
HLGDFIEDKNAVLPIDAAIQSNLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVG
QQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgacggacaaacccgaagccgatacgccctccgacggcccccttctcgac
ctgaccgatgccggcgtcaagaaattcatcaagaatgcgaaggcccgcggctacgtcacg
atggacgagctgaacaaggttctgccgtccgaagagtttacttcggagcagatcgaagac
acgctagccatgctcacggagatgggcgtgaatgtcgtcgattccgaagaggaagcgacc
gaaggtggcgaaatcgccgtccgcgaggaaaccggcggcgtggtcgttgccgagaagacc
tcggcttatgaccgcaccgatgaccctgtacgcatgtacctgcgcgaaatgggctcggtg
gagcttttgtcgcgcgaaggcgaaatcgcaatcgccaagcgcatcgaagccggtcgcgac
accatgatccgtggcctgtgtgaatcagccctgaccttcgaagccatcatgatctggcgc
gaggaactggagtctggccgcatcctgcttcgcgaaatcatcgacctcgaaggcacctac
ggcggcgggccgtcagaaggcccgcctccgggtgcattggatgatgaggccgaagaagag
gacgccgacgccccgattgcgatgcgggcgcccgaacctgttgtaaaggccccagaactc
aagcccgaacccaagccagaaccgcaacctgaggccaagaagccggagccgaaaaagaag
gcggacggcggggacgaggatgaggacgattacgtcccgatggatgaggaagagaaaaag
cctcagccggaagaagaagaggaagacgatttcgacgatggtgccggtccttcggtgtca
gcgatggaatccgaactgcgcgaaggcgtaatgtcgacgctcgacgctattgcgggtgag
ttcgaaacctatcgcggtctgcaagagcgcatcctgggcgctcgcctcgaaggcttgcct
gtcgaccctgccgacaaggtggcctatgatgaagtcacctcggccatcacccgtcacctc
aagacgctgaagctcaacaatcagcgtatcgaagccctggtggaacaactttatacgatc
aacaagcgcctgatgtcactggaaggccgcctgctgcgtctggccgactcctatggcatt
tcacgccaggaattcctgcagaactactaccaccgcgagctcgatcctcagtggacggat
aaagtgcgcgcgcttggcgtgcgttggcagaagtttgctgacaatgaagccggctccatc
ggccgaatccgcgccgacatcatccagctggctacggatatgggcgtggccgtggatgat
tatcggcgtatcgttcagacggtgcaaaaaggcgagcgcgaggcgcgtcaggccaagacc
gaaatggtcgaagcgaatctgcgcctcgtcatctctattgccaagaagtacaccaaccgt
ggcctccagttcctggacctgattcaggaaggcaatatcggtctgatgaaggcggtcgat
aagtttgaatatcgccgcggatacaagttctcaacctacgccacctggtggattcgccag
gccatcacacgctcgatagccgatcaggcgcgcaccattcgtatccccgtgcatatgatc
gaaacgatcaacaagatcgttcgcacatcgcgccagatgctgcacgaaatcggacgcgag
ccgaccccggaagaactggccgaaaagctggccatgccgctggagaaggtgcgcaaggtt
ctcaaaattgccaaagagccgatctccctcgaaaccccgatcggggacgaagaagattcg
cacctgggcgatttcatcgaagacaagaacgctgttctgcctatcgatgcggcgatccag
tcgaacctccgcgaaacgacaacacgcgttctggcctcactgacgccgcgtgaagagcgc
gtccttcggatgcgctttggtatcggcatgaacaccgaccacacccttgaagaggtgggt
caacagttctcggtgacgcgcgagcgtattcgtcagatcgaagctaaggctctgcgcaag
ctaaagcaccccagccgctcgcgcaaattgcgttcgttcctcgactcttag
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