Asticcacaulis excentricus: Astex_2377
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Entry
Astex_2377 CDS
T01378
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aex
Asticcacaulis excentricus
Pathway
aex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Astex_2377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aex03019
]
Astex_2377
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_2377
Enzymes [BR:
aex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Astex_2377
Messenger RNA biogenesis [BR:
aex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Astex_2377
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Astex_2377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
Motif
Other DBs
NCBI-ProteinID:
ADU14030
UniProt:
E8RND1
LinkDB
All DBs
Position
1:complement(2581438..2583030)
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AA seq
530 aa
AA seq
DB search
MLLDHPHDPVPEAGYGLSGPGLERVRAARETLKRVFHYDDFRGQQARVIAAILNGEDVLA
ILPTGGGKSLCYQIPSLMRPGFGLVISPLIALMADQVQALIKKGVRAERLDSSLSMDARY
QLWDRARDGEIDLLYLSPEALTQGFVLDKLSRLPVNLIAIDEAHCVSQWGHDFRPEYRAL
GKLKALFGNVPTLALTATADPHTRADIKKALHIENAAEVIDSFDRPNLSLRLMRRAGSAQ
KVILDMLRRQKNASGIIYAGSRDGAEKLARQLSAEGFKADAYHAGLPAKVRDERLHDFLS
DRTKIMVATIAFGMGINKPDVRFVIHADPPSSLEAYWQEVGRAGRDTKPAFGVCLFSSTD
LGWSLRRLSMRETETGADLSVQKQKALDFFRFVHSPDCRRKGVRRYFGEAPGENCGTCDN
CLSRAPVVDATEAAQMLMSALYRFNSPRGRKKLIEHVLGQNAQDYGSRLSTFGCAKGHYK
AEFLTDVLDLCEAEGLIVEELYDGKMPIVALERERFAALIRGELHLELRT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgatcatcctcatgaccccgtaccggaggccggttacggcctctcgggcccc
ggtctggaacgggtgcgcgcggcgcgcgagacgctgaaacgtgtttttcattacgatgat
tttcggggtcagcaggcccgggtgattgcggccatcctcaatggcgaggacgtgctggct
atcttgccgaccggcggcggcaagagcctgtgttaccagattccctctctgatgcggccg
ggctttgggctggtcatctcaccgctgatcgcgctgatggccgatcaggtgcaggcgttg
atcaaaaagggtgtgcgtgctgagcgcctcgattccagtttgtctatggatgcgcgttat
cagctgtgggaccgggcgcgagacggcgaaatcgaccttctttatctttcccctgaggcc
ctgacacagggctttgtgcttgataagctctcgcgtctgccggtcaatctgattgccatt
gacgaagcgcactgtgtatcgcaatgggggcacgactttcgcccggaatatcgggcactg
ggtaagcttaaggccctgttcggtaacgtcccgacactggccctgaccgctacggcggac
ccgcacacccgcgcggatatcaaaaaagcgctgcatatcgagaatgccgcggaggtcatt
gacagcttcgaccgcccgaacctgtctttgcgcctgatgcgtcgcgccggcagcgcgcag
aaggtgatcctcgacatgttgcggcggcaaaaaaatgcgtcgggcatcatctatgccggg
tcgcgcgacggggccgaaaaacttgcgcgccaattgtccgcggaaggctttaaggctgac
gcctaccatgccggtttaccggcaaaggtacgtgacgagcggttgcacgatttcctgtcg
gatcgtaccaagatcatggtggccactattgccttcgggatgggcatcaacaagcccgat
gtacgctttgtcatccatgcggatcccccttcgtcgctggaagcctactggcaggaggtc
ggacgcgccgggcgcgacaccaaaccggcctttggcgtctgtctctttagttcgaccgat
ctgggctggtcactgcggcggttgtcgatgcgtgagactgagacgggtgcagacctgtct
gttcaaaagcaaaaggcgttggatttctttcgctttgtccatagtccggactgccgccgc
aaaggggtgcgccgctattttggcgaagcgccgggtgagaattgcggcacctgcgacaac
tgtctgtcgcgcgcgccggtggtcgatgctacagaagccgcgcaaatgctgatgtcggcg
ctttaccgtttcaacagtccgcgtggccgcaagaagctgatcgaacacgtgctggggcaa
aacgcgcaggactatgggtcgcgcttgtccaccttcggttgcgccaaaggacactataag
gcggaattcctcaccgatgtgctcgacctgtgtgaggccgagggactgattgttgaggaa
ctttacgatggtaagatgcccatagtggcgctggagcgcgaacgttttgcagcccttatt
cgcggggaattgcatctggaattaaggacgtaa
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