Asticcacaulis excentricus: Astex_2842
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Entry
Astex_2842 CDS
T01378
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aex
Asticcacaulis excentricus
Pathway
aex03030
DNA replication
aex03430
Mismatch repair
aex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Astex_2842
03430 Mismatch repair
Astex_2842
03440 Homologous recombination
Astex_2842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aex03032
]
Astex_2842
03400 DNA repair and recombination proteins [BR:
aex03400
]
Astex_2842
Enzymes [BR:
aex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Astex_2842
DNA replication proteins [BR:
aex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Astex_2842
DNA repair and recombination proteins [BR:
aex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Astex_2842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
ADU14480
UniProt:
E8RSK9
LinkDB
All DBs
Position
2:517906..521334
Genome browser
AA seq
1142 aa
AA seq
DB search
MSDGFVHLRVRSAYSLLEGAIKAYDMGKLAAKAKMPAIAICDRANLFGALEFSQVCKDTG
VQPIIACALPVKGIGGTLSDRWAKTPTIVLIVQNEQGYLNLTELSSKAYLDIEATDEPHV
LWEEVVKRAEGLILLSGGPDGPINPLFKQNQPDEANAALKDMHAAFGDRFYIELQRHDGS
PHGGIRGDSAESGLVQFAYAHGVPLVATNDAYFADRDMFKAHEALLCISDSTFMGVADRR
KVTKDHWLKPPLLMREVFSDLPEACDNTLEIARRCAFLVSKRDPILPRFDTGAGRSEDEE
LAFQAREGLKMRLQQVEPAFPEEDYWARLDREVGVIQKMGFPGYFLIVSDFIKWAKAHDI
PVGPGRGSGAGSLVAWALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIT
YVQEKYGRERVAQIITFGTLQARAVLRDTGRVMQLPLGQVDRLCKMVPNNPANPTTLAQA
VEIEPRLREARDEEESVAKLLDTALKLEGLYRNASTHAAGIVIGDRSLTELVPLYRDPRS
DIPATQFNMKWVESAGLVKFDFLGLKTLTTLNRAWHYLKKRGLEVDFSTLPLDDKITYEL
LASGQSIGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMDNIDTYVDRKFGRADI
DMLHPSLEPVLRETYGVIIYQEQVMQIAQILSGYSLGEADLLRRAMGKKKKEEMDLQKAR
FISGAKEKGVPEKQSDSIFELVNKFAGYGFNKSHAAAYAFISYQTGWLKANHPVEFFAAN
MSLDITNTDKLAVFYQDARQFGVTIRPPDINRSKADFDVENGEVLYALGAIRNVGLEAMH
SVVAVREAGGPFKDIFDFLERIDPKAVNKRAIENLARAGAFDSIHPNRAQIIQSADLLIA
HAQSMAAERASAQVSLFGTNDSSRPRLPNIPKASGPDALDEELSAVGFYLSGHPLQDMVD
VFKRRNVTLYAEALALAQEGREAFRMAGVVRRRQERASARTGEKFAFVNLSDPSGEYEVM
FQPEALRKYREHLEPGQSILLKVRCKGSDGEVRMFGESAEPMAGALKTDDMGLRLTVSPR
GFDVDAFKMQLDAARGQGGEITLLSEIDGHEVELKMPHRYRLDASLRGALKAMNGVLYCE
DV
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggttttgtccatctgcgggtacgatcagcctattcccttctggaaggcgcg
atcaaggcctatgatatgggcaagctggcggctaaggcgaagatgccggccatcgccatc
tgtgaccgtgccaacctgtttggtgcgctcgaattttctcaggtgtgtaaagatacgggc
gtgcagcccattatcgcctgcgctctgccggtcaaggggataggcggcacccttagcgac
cgatgggcgaaaactccgactattgttctgatcgttcagaacgagcagggctatctcaac
ctcaccgaactttcgtccaaagcctatctcgatattgaggcgaccgatgaaccgcatgtc
ctgtgggaagaggtggtcaaacgcgccgagggcctgatcctgctgtcgggcggtccggac
ggtccgatcaacccgttgttcaagcaaaaccagcccgacgaagccaatgcggcactgaag
gatatgcatgcggcctttggggaccgcttttacatcgagcttcagcggcacgacggctcg
ccgcatggtggtatccgcggggactcggcggaaagcggtctggtgcaatttgcctatgcg
catggcgtgccgctggtggcgaccaatgacgcctactttgccgaccgtgacatgttcaag
gcgcacgaagcgctgctgtgtatttccgatagcacctttatgggcgtggccgaccggcgc
aaggtgaccaaggatcactggctgaagccgccgctgctgatgcgcgaggtcttctcggat
ctgcccgaagcctgcgacaatacgctggaaatcgcacgccgctgcgcctttttagtcagc
aagcgcgatccgatcctgccgcgttttgataccggcgcaggtcgatcggaagacgaagaa
ctggcctttcaggcgcgtgaaggcctgaaaatgcgcctgcaacaggtcgaacccgccttc
cccgaagaagattactgggcgcgtctcgatcgtgaggtgggcgtcatccagaaaatgggg
ttccccggttacttcctgatcgtttcggactttatcaaatgggccaaggcgcacgacatt
ccggtcgggccgggccggggctcgggggccggttcgctggtcgcgtgggcactgaccatc
accgatcttgacccgctgcgctttggtctactgttcgaacgcttcctcaatccggagcgg
gtttccatgcccgacttcgatatcgacttctgtcaggaacgccgcgaagaggtgatcacc
tacgttcaggaaaaatatggccgtgagcgggtggcgcagatcatcaccttcggtacgctt
caggcgcgcgctgtgctgcgcgacacaggccgcgtgatgcagttgccgctggggcaggtg
gaccgtctgtgtaagatggtgcccaataacccggccaacccgaccacactggctcaggct
gtcgaaatcgaaccccgtctgcgcgaagcccgcgacgaagaagagtctgtcgctaagctg
ctggatacggcgctgaaactcgaaggcctgtaccgcaacgcctcgacccatgccgcaggt
atcgtgatcggcgatcggtcgctgaccgagttggtgccgctgtatcgcgatccacgctcc
gacattccggcgacgcagtttaatatgaagtgggtcgagagcgctggtctggtcaagttc
gacttcctgggtctgaagaccctgaccacgctgaatcgcgcctggcattatctgaaaaag
cgcgggcttgaggtcgatttctctaccctgccgctggatgacaagatcacctatgagttg
ctggcgtcaggtcagtcgattggcgtgttccagctcgaaagtcaggggatgcgcgatacc
ctgcgcaagatgcgctgcgggtctatcgaggaaatcaccgcgctgatttcgctctatcga
ccgggtccgatggacaatatcgacacctatgtcgatcggaagttcgggcgcgccgacatc
gacatgctccacccctctctggagccggttctgcgggaaacctacggcgttattatctat
caggaacaggtgatgcagatcgcccagatcctgtcgggttatagcctcggcgaagccgac
ctgctgcgtcgggccatgggtaaaaagaagaaagaggaaatggacttgcaaaaagcaagg
tttatttccggcgccaaggagaagggggttcctgaaaagcagtcggactcgatcttcgaa
ctggtgaacaagtttgccggctatggcttcaacaaatcacacgccgccgcctacgccttt
atttcgtatcagacgggctggctgaaggccaatcatccggtcgaattcttcgccgccaac
atgagtctcgatatcaccaataccgacaagctggcggtattttatcaggacgcgcggcag
ttcggggtgaccatccggccaccagatatcaaccgctcaaaggccgatttcgacgttgaa
aatggcgaagtgctgtatgcgcttggggccatacgcaatgtcggtctcgaagccatgcac
agcgttgtggcggtgcgtgaagcgggcgggccgttcaaagacattttcgacttcctcgaa
cgtatcgaccctaaggcggtcaataagcgtgccatcgaaaatctggcgcgggccggggcc
tttgactcgatccatcccaaccgggcacagattatccaaagcgccgatctgctgatcgcc
cacgctcagagcatggccgctgaacgcgcctcagcgcaggtcagcctgtttggcaccaat
gactcatcgcgcccgcgcctgcccaacatccccaaggcctccggtccggatgcgctggac
gaagaactgtcagccgttggtttttacctgtccggccacccgttgcaggacatggtcgat
gtgttcaagcgccgcaatgttaccctgtacgccgaagcgctggccctcgctcaggaaggg
cgcgaagccttccgcatggcgggggtggtgcgtcgtcgtcaggagcgcgcctcggcccgc
accggggagaaattcgccttcgtcaacctttcggaccccagcggcgaatatgaggtgatg
ttccagccggaagccctgcgcaaataccgtgagcatctcgaacctggtcagtcgatcctg
ctcaaggtgcgttgcaagggttcggacggcgaagtacgcatgtttggtgagtccgccgaa
cccatggccggagccctgaaaaccgatgatatgggactgcgtttgactgtgtcgccacgt
ggctttgatgtggacgctttcaaaatgcaattagacgccgcgcgcggacaggggggcgaa
atcaccctcctcagcgagatcgacggacatgaggtcgaactgaaaatgccgcaccgctac
cgtctggacgccagcctgcgcggggccttgaaagcgatgaatggcgtcctatattgtgaa
gatgtttag
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