| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
aex Asticcacaulis excentricus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aex00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Astex_2989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:aex03021]
Astex_2989
03400 DNA repair and recombination proteins [BR:aex03400]
Astex_2989
Enzymes [BR:aex01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Astex_2989
Transcription machinery [BR:aex03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Astex_2989
DNA repair and recombination proteins [BR:aex03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Astex_2989
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(670590..674774)
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| AA seq |
1394 aa
MNQEVLNIFNPVQVAPTFDQIRITLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELASPVAHIWFLKS
LPSRIAMFLDMALKDVERVLYFENYIVTEPGLTPLKLNSLLSEDEYYRYQEEFGDDSFTA
EIGAEAIRNMLMSMDLNEVADKLRAELADNPSEMKAKKASKRLKLIENFIESGNRPEWMV
LTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILEEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGELGEGMIFADLNEIQSALD
AGVVSMHAKVKCRFTEVDPDGVQRTRVIDTTPGRMKIAALLPLHASIGVRVLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMALGFKEAARAGISFGKDDIVIPETKHGIVEETRKL
VEEYEQQYADGLITKGEKYNKVVDAWSKATDRVSDEMMKEISRKLKTDDGREKEINSIYM
MANSGARGSQAQMKQLGGMRGLMAKPDGSIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIIMEEDCGTTKGITMRAVVEGGDVLVSLGARVLGRTT
AEDIKDVASGEVVVPADTYVDENVVEQIEASGVQSVKVRSVLTCEAEQGTCAACYGRDLA
RGTRVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAEQSFYETTSDGVIKLSAAPT
VRGSHGDLISMSRNLIITIFHDGKDRETYKVPYGSRLRVEEGTEVKKGQRLAEWDPYTTP
IITEVGGKIRFEDLTEGQSVREETDEATGITNRVVTDFRASSRAADLRPTLGLIDDAGAY
KRLSNGAEARYLLPVGAILSVGNGDEVRPGEIIARIPTEGAKTRDITGGLPRVAELFEAR
RPKDCAVIAEMDGRVEFGRDYKNKRRIKITPEDGGEPVEFLIPKGKHISVHDGDIIQKGD
YIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVVVRQMLQKVEILE
PGDTGLIKGDQLDKGEVEAENLKAEKRGGRPALTAPVLLGITKASLNTKSFFSAASFQET
TRVLTEASVQGKIDTLDGLKENVIVGRLIPVGTGAYLRRLQRIALKRDEALAHQREETME
PLPAEVLLEGPAAE |
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| NT seq |
4185 nt +upstreamnt +downstreamnt
atgaaccaggaagtcctcaatatcttcaatccggtccaggtcgccccgaccttcgaccag
atccgcatcaccctggcctcgcccgaaaagatcctgtcgtggtcgttcggtgagatcaag
aagccggaaaccatcaactaccgcacgttcaagccggaacgtgacggcctattctgcgcc
cgtatcttcggaccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcattatctgcgaaaagtgcggcgtcgaagtgaccctgtcgcgcgttcgccgt
gaacgcatgggccatattgagctggcgtcgccggtcgcgcacatctggttcctgaagtcg
ctgccgtcgcgcatcgccatgttcctcgatatggcgctgaaagacgttgagcgtgttctg
tactttgaaaactacatcgtcaccgagccgggcctgacgccgctgaagctcaactcgctg
ctcagcgaagacgagtactatcgctatcaggaagagttcggcgacgacagcttcaccgcg
gaaatcggggccgaagccatccgtaacatgctgatgtcgatggacctcaacgaggtcgcc
gacaagctgcgcgctgagctggccgacaatccgtcggaaatgaaggccaagaaggcgtcc
aagcgcctcaagctgatcgaaaacttcatcgaatccggcaaccgtccggaatggatggtg
ctgacggtcgtgccggtcatcccgccggaactgcgcccgctggtgccgctggacggtggc
cgttttgccacctcggacctcaacgacctctatcgccgcgtcatcaaccggaacaaccgt
ctgaagcgcctgatggaactgcgcgcgccggacatcatcatccgcaacgaaaagcggatg
ttgcaggaatcggtcgatgcccttttcgataacggccgtcgcggtcgcgtcatcactggc
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggtaagcagggtcgcttc
cgtcagaacctgctcggcaagcgcgtggactattccggtcgttcggttatcaccgtcggt
ccggaactgaagctgcacgaatgcggcctgccaaagaagatggcgctggaactgttcaag
cccttcatctatgcgcgtctcgacgccaagggcctttcgggcaccgtgaagcagtccaag
cgcatggtcgagcgcgagcagccgcaggtgtgggatatcctcgaagaggtcatccgcgaa
cacccggtcctgctcaaccgcgccccgacgctgcaccgcctcggcattcaggcctttgag
ccgaagctgatcgaaggcaaggcgatccgtctgcacccgctcgtctgttcggccttcaac
gccgacttcgacggtgaccagatggccgtccacgtgcctctgtcgctcgaagctcagctc
gaagcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtgctgggtctctactacctgtcgctggtcaaggac
ggtgagctgggtgaaggcatgatcttcgccgatctcaacgaaatccagtccgcgctcgac
gctggcgtcgtctccatgcacgccaaggtcaagtgccgcttcaccgaagtggacccggac
ggtgttcagcgtacccgcgtcatcgacacgacgccgggccgcatgaaaatcgctgccctg
ctgccgctgcacgcctccatcggcgtccgcgttctggaaaagaacctgaccaagaaggaa
attggcaacctgatcgatgtggtctatcgccactgcggtcagaaggcgacggtgatcttc
gccgaccagatgatggctctgggcttcaaggaagccgcccgcgccggtatctcgttcggc
aaggacgacatcgttatccccgaaaccaagcacggcatcgtcgaagagacgcgcaagctg
gtggaagaatacgagcagcaatacgccgacggtctgatcaccaagggtgaaaagtacaac
aaggtggttgacgcctggtccaaggcgaccgaccgagtgtcggacgagatgatgaaggaa
atcagccgcaagctgaagaccgacgatggccgtgaaaaagagatcaactcgatctacatg
atggccaactccggtgcccgtggttcgcaggcccagatgaagcagctcggcggaatgcgc
ggcctgatggccaagccggacggttcgatcatcgaaacgccgatcatctcgaacttcaag
gaaggcctgaccgttcttgagtacttcaactcgacccacggtgcccgtaagggtctggcc
gataccgcgctgaagaccgccaactccggttacctgacccgtcgtctcgttgacgtggct
caggactgcatcatcatggaagaggactgcggcacgaccaagggcatcaccatgcgcgcc
gtcgtcgaaggcggtgacgtgctggtgtctctgggcgcgcgcgtcctcggtcggaccacg
gccgaagacatcaaggacgtcgcttcgggcgaagtcgttgtcccggccgacacctatgtc
gatgaaaacgtcgtcgaacagatcgaagcctccggcgttcagtcggtcaaggtgcgctcg
gtcctcacctgtgaggccgaacagggcacctgcgccgcctgctacggtcgtgacctggcc
cgcggcacccgcgtcaatatgggtgaagcggtcggcgtcatcgctgcgcagtcgatcggt
gaaccgggcacccagctcaccatgcgtaccttccacatcggcggtacggctcaggtggcc
gagcagtccttctatgagacgacttcggatggcgtgatcaagctgtcggcggctccgacc
gtccgcggctcgcacggtgacctgatctccatgtcgcgcaacctgatcatcaccatcttc
cacgatggcaaggatcgcgaaacctataaggtgccttacggctcgcgtctgcgcgtcgaa
gaaggcaccgaggtcaagaagggccagcgtctggcggagtgggacccctataccaccccg
atcatcaccgaagtcggcggtaagatccgcttcgaagacctgaccgaaggtcagtcggtc
cgcgaggaaaccgacgaagccaccggcatcaccaaccgcgtcgtcaccgacttccgcgct
tcttcgcgcgcggcggatctgcgtccgaccctgggtctgatcgacgatgccggcgcttac
aagcgtctgtcgaacggggccgaagcccgctacctgctgccggtcggggccattctctcc
gtcggcaatggggacgaggtccgtccgggtgaaatcatcgcccgtatcccgaccgaaggc
gccaagacccgcgacatcaccggcggtctgccgcgcgtcgccgaactgttcgaagcccgc
cgtccgaaggactgcgccgtcatcgctgaaatggatggccgcgttgaatttggccgcgat
tacaagaacaagcgccgcatcaagatcaccccggaggacggtggcgaacccgtcgaattc
ctgatcccgaagggcaagcatatctccgtccacgacggcgatatcatccagaagggcgac
tacatcatcgacggcaaccccgatccgcacgatctgctgcgtattcagggcgtcgaggcg
ctggccgaatacctcgtcaacgaggtgcaggaagtctatcgcctgcaaggcgtgccgatc
aacgacaagcacatcgaagtcgtggtccgtcagatgctgcaaaaggtcgaaatcctggag
cccggcgataccggcctcatcaagggcgatcagctcgacaagggcgaagtggaagccgag
aacctcaaggccgaaaagcgtggcggtcgtccggccctcacggctccggtcctgctcggt
atcaccaaggcctcgctcaacaccaagagcttcttctcggccgcttcgttccaggaaacg
acgcgcgttctgaccgaagcctcggtgcaaggcaagatcgacacgctcgacggtctgaag
gaaaacgtcatcgttggccgtctgatcccggtcggcaccggcgcctacctgcgtcgtctg
caacgcatcgccctgaagcgcgacgaggctctggcccatcagcgcgaagagacgatggaa
ccgctgccggcggaagtcctgctcgaaggccctgccgccgagtaa |
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