Actinopolyspora erythraea: CDG81_00415
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Entry
CDG81_00415 CDS
T05020
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aey
Actinopolyspora erythraea
Brite
KEGG Orthology (KO) [BR:
aey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aey03016
]
CDG81_00415
Enzymes [BR:
aey01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CDG81_00415
Transfer RNA biogenesis [BR:
aey03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CDG81_00415
Prokaryotic type
tRNA splicing ligases
CDG81_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ASU80700
UniProt:
A0A223RXU4
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All DBs
Position
93587..94735
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AA seq
382 aa
AA seq
DB search
MWAAEHEVEPAVLDQLRNIAALPWVHGVRVMPDVHLGKGATVGSVIAMRQAVSPAAVGVD
IGCGMEGVKTSLRAEDLPADLGGIRASIERAVPVGFRAHEEAVDPARLGLDTSEWKDLWK
RYGELHAGVSSLEGKAGKQLGTLGGGNHFIEVCLDEHDTVWIMLHSGSRHIGKQLAEQHI
AEARELPHNRDLPDRDLAVFVADTPQMAAYRHDLFWAQEYARVNRRIMLALTTRALRGCF
ADREVAFHEPISCHHNYVAEETVDGQPMLVTRKGAIRAGKGDMGLIPGSMGTGSYVVRGL
GSAESFQSAAHGAGRRMSRSKAKKTFGSQDLLRQTSGVECRKDDGVLDEIPGAYKDIDSV
IAAQSDLVEVVAKLRQIVCVKG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggccgagcacgaggtcgaaccggccgtgctcgaccagttgcgcaacatcgcg
gccctgccgtgggtgcacggcgtccgggtgatgcccgacgtgcacctgggcaagggcgcc
acggtcggttcggtcatcgccatgcggcaggccgtctcccccgccgccgtgggggtggac
atcggctgcggcatggagggcgtcaagacctcgctgcgggcggaggacctgccggccgac
ctcggcgggatccgcgcgagcatcgagcgcgccgttccggtgggcttccgggcgcacgag
gaggccgtggacccggcccggctgggcctggacacctcggagtggaaggacctctggaag
cgctacggcgagctgcacgccggagtgagctcgctggagggcaaggcgggcaaacagctg
ggcacgctcggcggtggcaaccacttcatcgaggtgtgcctggacgagcatgacacggtc
tggatcatgctgcacagcggctcccggcacatcgggaagcaactcgccgaacagcacatc
gccgaggcccgcgaactcccgcacaaccgggacttgccggaccgcgacctggcggtcttc
gtcgccgacaccccgcagatggcggcctaccggcacgacctgttctgggcccaggagtac
gcgcgtgtgaaccggcggatcatgctcgcgctgaccacgcgcgcgctgcgcggctgcttc
gccgacagggaggtggccttccacgagccgatctcctgccaccacaactacgtggccgag
gagacggtcgacggtcagcccatgctggtcacccgcaagggagcgatccgggcggggaag
ggagacatggggctcatccccggctcgatgggaaccgggtcctacgtggtccgcggcctc
ggttcggccgagtccttccagtcggcggcgcacggcgccgggcgcaggatgagcaggagc
aaggccaagaagacgttcggttcccaggacctgctgcggcagacctcgggggtggagtgc
cgcaaggacgacggggtgctcgacgagatcccgggggcctacaaggacatcgactccgtc
atcgcggcgcagtcggacctggtggaggtggtggccaagctgcgccagatcgtctgcgtg
aaggggtag
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