Actinopolyspora erythraea: CDG81_05935
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Entry
CDG81_05935 CDS
T05020
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aey
Actinopolyspora erythraea
Pathway
aey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDG81_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aey03019
]
CDG81_05935
03400 DNA repair and recombination proteins [BR:
aey03400
]
CDG81_05935
Enzymes [BR:
aey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDG81_05935
Messenger RNA biogenesis [BR:
aey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDG81_05935
DNA repair and recombination proteins [BR:
aey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDG81_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
ASU77928
UniProt:
A0A223RQ12
LinkDB
All DBs
Position
complement(1312411..1314687)
Genome browser
AA seq
758 aa
AA seq
DB search
MAVHRQRHGPRPDGAAQRAPPQHRRRQHAAHRAAHHRAAPPVVPAANGCGKNRPVDEQAL
REMAEEHLRALAGPTATLREDQWSAIRALVLERRRALVVQRTGWGKSAVYFVATALLRDL
GEGPTVIVSPLLALMRNQVEAASAAGVQAATINSANPDEWASIEEEVAVGDVDVLLVSPE
RLNNPDFRENVLPELTRNTGLVVVDEAHCISDWGHDFRPDYRRLRTLLTELPEGVPVLAT
TATANDRVVRDVSDQLGVTEDSNAPSTPLVLRGSLDRESLRLGVVPLHSTRERLGWLADH
LEGLPGSGIIYTLTVATAEEVAEFLTERGFAVSSYSGRTEANERAAAESALLNNEVKALV
ATSALGMGFDKPDLGFVIHLGAPASPIAYYQQIGRAGRGVEHAEVVLLPGEEDQRIWDYF
TSLTFPDEATVRAVLHTLDNADKPLSTAALEPHVELSRSRLEMVLKVLDVDGAVKRVKGG
WTATGQPWSYEGERYERIARQRRAEQQSMLDYQRTAKCRMEFLRSELDDPHAEPCGRCDN
CTGVAYSTEVDSVTSESARQRLERAGVTLSPRKMWPNGMRAVDIPVSGKIAPSEQHEPGR
ALGRFSDIGWGGKLRELLGPEASDGEVPEELVQACVRVLADWDWARRPAGVVAMGSSARP
MLVASLAERIAAIGRLPLLGHVAHDPARRTQRSHNSARRLAGLWSRFGLPDELSLTELGG
PVLLVDDYTDTGWTLAVVARMLRQAGASGVLPLTLAST
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccaccggcagcgccacggcccgcgaccggacggagccgcccaacgggcacca
ccacagcaccggcggcgccagcatgccgctcaccgcgccgcacaccaccgggcggcgcca
cccgttgtcccggccgcgaacggctgcggtaagaatcggcccgtggatgaacaggcgctt
cgcgaaatggccgaggaacacctccgcgcgctggcaggccccaccgccacgttgcgcgag
gaccagtggagcgccatccgcgcactggtgctggagcggcgtcgggcgctggtggtacag
cgaaccggctggggaaagtcagcggtgtacttcgtggccacggccctgctgcgtgatctc
ggcgaaggacctacggtcatcgtctccccgctgctggcgctgatgcgcaaccaggtcgag
gccgcctcggcggccggcgtgcaggccgccaccataaactccgccaatccggacgagtgg
gcctcgatcgaggaagaggtcgccgtgggcgacgtggacgtgctgctggtcagtccggaa
cggctgaacaacccggacttcagggagaacgtgctgccggagctcacccgcaacaccggc
ctggtcgtggtcgacgaggcccactgcatctccgactgggggcacgatttccgccccgac
taccgcagactgcgcaccctgctgaccgagctgcccgagggtgtacccgtgctggccacg
accgccaccgccaacgaccgggtggtgcgggacgtctcggaccagctcggggtcaccgag
gactcgaacgccccgagcaccccgctggtactgcgcggctcgctggaccgcgagagcctg
cgcctcggcgtggttccgctgcactccacgcgggagaggctgggctggctggccgaccac
ctcgaggggcttcccggttccgggatcatctacaccctgacggtggccaccgccgaggag
gtcgccgagttcctcaccgagcggggcttcgcggtcagttcgtactcgggccgcaccgag
gcgaacgaacgggccgctgccgagtccgccctgctgaacaacgaggtcaaggccctggtg
gccacctcggcactggggatgggcttcgacaagcccgacctcggattcgtgatccacctc
ggcgctccggcctcccccatcgcctactaccagcagatcggtcgcgccgggcggggcgtc
gaacacgccgaagtggtgctgctgcccggtgaggaggaccagcggatctgggactacttc
acctcgttgacctttccggacgaagcgaccgtgcgcgcggtgctgcacaccctcgacaac
gccgacaagccgctctccaccgccgcgctggaaccacacgtggaactgagcaggtcccgc
ctggagatggtgctcaaggtgctcgatgtggacggtgcggtgaagcgggtgaagggcggt
tggaccgctaccggccagccctggtcgtacgagggcgaacgctacgagcggatcgcgcgg
cagcgccgggccgagcagcagtcgatgctggactaccagcgaaccgcgaaatgccgcatg
gagttcctccgttccgaactggacgacccccacgccgagccgtgcgggcgctgcgacaac
tgcaccggggtggcgtactccaccgaggtggactcggtcacctccgaatccgccaggcag
cggttggaacgcgcgggagtcacgctcagcccccgcaagatgtggccgaacggcatgcgg
gcggtcgacatcccggtgtccggcaagatcgccccgtcggaacagcacgagccggggcgg
gcgctcggcaggttcagcgacatcggctggggcggcaagctgcgcgaactgctgggtccg
gaggcctccgacggcgaagtgccggaagaactggttcaggcgtgtgtgcgcgtcctcgcc
gactgggactgggcacgacggcccgccggggtcgtcgcgatggggtcctcggcgaggccg
atgctggtagccagtctggcggagcggatcgcggccatcggcaggcttccgctgctgggg
cacgtggcgcacgatcctgccaggcgaacgcagcgcagccacaacagcgcacggcggttg
gccgggttgtggtcacggttcggcctgcctgacgaactctccctcaccgagctgggcgga
ccggtactgctggtggacgactacaccgataccggctggaccctcgcggtggtggcccgg
atgctgcgccaggccggtgcctccggagtgctcccactgaccctcgccagcacgtga
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