KEGG   Actinopolyspora erythraea: CDG81_07725
Entry
CDG81_07725       CDS       T05020                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aey  Actinopolyspora erythraea
Pathway
aey03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aey00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDG81_07725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aey03019]
    CDG81_07725
Messenger RNA biogenesis [BR:aey03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CDG81_07725
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 RMMBL Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ASU78207
UniProt: A0A223RQV1
LinkDB
Position
1706408..1708135
AA seq 575 aa
MTARATSTEKHPLTPTSATPAPPPLEEGALRVVALGGIGEVGRNMTVFEYDGRLLVVDCG
VLFPEDDSPGVDLILPDFGPIENRLDEIEAVVLTHGHEDHIGAIPFLLRQRPDLPVVGSK
FTLALLSAKCQEHRLSPKLVEVAEGQRSSHGEFDLEFFAVNHSIPDALAVAIRTPAGTVL
HTGDIKLDQLPLDGRLTDLAGFARMGAEGVDLFLVDSTNAEVPGFVTPEREIGPVLDSVI
GRATQRVIVACFASHVHRVQQVLDVAASYGRKVCLVGRSMVRNMGIAAEHGILRVPEGAL
VDLEEALQLPTESVVFVSTGSQGEPLSALSRMARGEHKQISIQHGDTVILASSMIPGNET
AVFGVVNGLVRLGAEVVHQGSAKVHVSGHASAGELLYLYNAVRPANVMPVHGEWRHLRAN
AELATLTGVQPDRVAIAEDGVVVDLIDGIASIAGRVEVGHVYVDGLSVGDVGESTLSDRL
VLGEGGFISITVAVEAGTGRAVSPPTVSGRGFSDDPKALDEVVPLVEMELSRTEAEGITD
THRIAQTVRRTVGKWVADTYRRRPMIVPNVLPVSS
NT seq 1728 nt   +upstreamnt  +downstreamnt
ttgacagcacgcgcaacgtcgaccgagaaacatcccctgacaccgacgtcggcgactccc
gcgccgcctccgctggaggagggcgcgctgcgagtggtcgccctcggcggtatcggtgag
gtcggcaggaacatgaccgttttcgagtacgacggtcggttgctggtggtcgactgcggt
gtgctgttcccggaggacgactctcccggcgtggatctgatactgcccgacttcgggccg
atcgagaaccgtctcgacgagatcgaggcggtcgtgctcacccacggtcacgaggaccat
atcggggcgatccccttcctgctgcggcagcgcccggaccttccggtggtcggttccaag
ttcaccctcgcgctgctgtccgccaagtgccaggagcaccggttgtcgccgaagctcgtc
gaagtcgccgaggggcagcgcagcagccacggcgagttcgacctcgagttcttcgccgtg
aaccactcgattccggacgcgctggccgtggccatccgcaccccggcggggacggtgctg
cacaccggcgacatcaagctcgaccagctcccgctggacggccggttgaccgacctcgct
ggattcgcccggatgggggctgagggggtcgacctgttcctggtcgactccaccaacgcc
gaggtgccgggattcgtcaccccggagcgcgagatcgggccggtgctggactcggtgatc
ggacgcgccacgcagcgcgtgatcgtcgcctgcttcgccagtcacgtgcaccgggtgcag
caggttctcgacgtggctgcctcctacgggcgcaaggtctgtctggtcgggcgttccatg
gtgcgcaacatggggatcgcggcggagcacgggatcctgcgggtgccggagggcgcgctg
gtcgacctggaagaggccctgcagctgccgacggagtcggtggtgttcgtgtccacgggc
tcgcagggggagccgttgtcggccctgtcgcggatggcgcggggcgagcacaagcagatc
agcatccagcacggcgacacggtcatcctggccagctcgatgatccccggcaacgagacc
gcggtgttcggcgtggtcaacggcctggttcggctgggggccgaggtggtgcaccagggc
agcgccaaggtgcacgtctccgggcacgcctcggcgggcgagctgctctacctgtacaac
gcggtgcgcccggccaacgtgatgccggtgcacggggagtggcggcacctgcgggccaac
gccgagctggccacgcttaccggggtacagcccgaccgggtggccatcgccgaggacggc
gtggtggtggacctgatcgacgggatcgccagcatcgcgggccgggtcgaggtcggacac
gtctacgtggacgggctttcggtcggtgacgtcggtgagtccacgttgtccgaccggctg
gtgctcggcgagggcggcttcatctccataacggtcgcggtggaggcgggcacgggacgg
gcggtttcccctcctacggtgtccggcagggggttctcggacgatcccaaggcgctggac
gaggtcgttccgctcgtggagatggaactctcccgcaccgaggcggagggcatcaccgac
acgcaccggatcgcgcagacggtgcggcgcacggtcggcaagtgggtcgccgacacctac
cgacgtcgtcccatgatcgtgccgaacgtgctgccggtgagctcctga

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