KEGG   Actinopolyspora erythraea: CDG81_20035
Entry
CDG81_20035       CDS       T05020                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
aey  Actinopolyspora erythraea
Pathway
aey03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aey00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CDG81_20035 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aey03021]
    CDG81_20035 (rpoC)
   03400 DNA repair and recombination proteins [BR:aey03400]
    CDG81_20035 (rpoC)
Enzymes [BR:aey01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CDG81_20035 (rpoC)
Transcription machinery [BR:aey03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CDG81_20035 (rpoC)
DNA repair and recombination proteins [BR:aey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CDG81_20035 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 TarH
Other DBs
NCBI-ProteinID: ASU80178
UniProt: A0A099D8K3
LinkDB
Position
complement(4573363..4577274)
AA seq 1303 aa
MLDVNFFDELRIGLATADEIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAAVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVITSVNTEMRHNDMPTLESEIGVERKNIADQRDSDLEARAQKLESD
LAELESEGAKSDVRRKVKESGEREMRQIREKAQKEIDKLDEIWETFTKLEPRQLISDESL
YRELYDRYGEYFTGGMGAEAIEALLANFDIDAEAEGLREVIRNGKGQKKLRALKRLKVVA
AFQTTKNNPQGMVLGAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIINNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKEMAVELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAVQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGRPLAMPRLDMVTGLYYLTRQVDGATGEGH
AFSSYDEALMAHDRGSLDLQALVKIRMRDIVPSKEETPEDWEPGTPMTLQTTLGRVMFNE
LLPSDYPFVNRLLPKKAQGAIVNDLAERYPMVSVAQTLDKLKDAGFYWATRSGVTTAISD
VIVPPNKKEILDSYEEKADQVEKRYRRGALSHEERNAELVKVWNAAKDDVSEAMENNFPE
DNSINMIVKSGAAGNMSQVVQLAGMRGLVSNPKGEYIPRPIKTNFREGLSVLEYFISNHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVRENDCGTDRGIRMPIGETTPDGKLVREQH
VETSVYARMTAEDVTDSEGNILLARGSDLGDPAIETLISAGVSTVRVRSVLTCESGSGVC
SYCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDDITAGLPRVQEL
FEARLPKGKAPIADASGRIRLEDNDRYWKMTLTPDDGGEDITYDKLSKRQRLAVINVQGT
ERQLEDGDHVEVGQRLMEGAVDPHEILRVLGPREAQLHLVREVQEVYRSQGVGIHDKHVE
VIVRQMLRRVIIIDSGATEFLPGSPVERAQFESENRRVVSEGGDPASGRPVLMGITKASL
ATESWLSAASFQETTRILTNAAIEGASDKLIGLKENVIIGKLIPAGTGINKYRNIQVQPT
EEARAAAYAIPSYDDGYYAPDVFGPGTGAAVPLDDFDFGRDYR
NT seq 3912 nt   +upstreamnt  +downstreamnt
gtgcttgacgtcaacttcttcgacgaactccgcatcggactcgcgactgccgacgagatc
cgccagtggtcgtacggcgaggtcaaaaagcccgagaccatcaactaccgcacgctcaag
ccggagaaagacgggctgttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgagtccgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacccgggccaaggtgcggcgcgagcggatggggcacatcgagctggccgccgcg
gtcacccacatctggtacttcaagggcgtgccgagcaggctcgggtacctgctcgacctg
gcccccaaggacctggaaaagatcatctacttcgcgtcgtacgtgatcacctcggtcaac
accgagatgcgtcacaacgacatgccgacgctggagagcgagatcggcgtcgagcgcaag
aacatcgccgaccagcgtgactcggacctggaggcgcgggcccagaagctcgagtcggac
ctcgccgagctcgagtccgagggcgccaagagcgacgttcgccgcaaggtcaaggagagc
ggcgagcgcgagatgcgccagatccgcgagaaggcccagaaggagatcgacaagctcgac
gagatctgggagaccttcaccaagctggagccccgccagctgatctcggacgagtcgctg
taccgcgagctctacgaccgctacggcgagtacttcaccggcggcatgggtgccgaggcc
atcgaggccctgctcgccaacttcgacatcgacgccgaggcggagggcctgcgggaggtc
atccgcaacggcaagggccagaagaagctgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttccagacgaccaagaacaacccgcagggcatggtgctcggcgcgatcccggtgatc
ccgccggacctgcgtcccatggtccagctcgacggcggccgcttcgcgacctccgacctc
aacgacctctaccgcagggtcatcaaccgcaacaaccgcctcaagcgcctgatcgacctc
ggtgcccccgagatcatcatcaacaacgagaagcggatgctgcaggagtcggtggacgcg
ctgttcgacaacggcaggcgcggccgtccggtcagcgggccgggcaaccgcccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccggttcaggcagaacctgctgggtaag
cgtgtggactactcgggccgttcggtcatcatcgtcggtccgcagctgaagctgcaccag
tgcggcctgccgaaggagatggcggtcgagctgttcaagccgttcgtcatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgc
ccccaggtctgggacgtgctcgaagaggtcatctccgagcacccggtgctgctcaaccgc
gcgcccacgctgcaccggctgggtatccaggccttcgagccgcagctggtggagggcaag
gcggttcagctgcacccgttggtctgcgaggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgtccgccgaggcgcaggccgaggcccgggtgctgatgctg
tccagcaacaacatcctctcgcccgcctccgggcgtccgctggccatgccgcggctggac
atggtcaccgggctgtactacctgacccggcaggtcgacggtgccaccggtgaggggcac
gccttctcctcgtacgacgaggcgctgatggcccacgaccggggatcgctcgacctgcag
gcgctggtcaagatccggatgcgcgacatcgtcccgtcgaaggaggagactccggaggac
tgggaaccgggtaccccgatgacgctgcagaccaccctcggccgggtgatgttcaacgag
ctgctgccctcggactaccccttcgtcaaccggctgctgccgaagaaggcccagggtgcg
atcgtcaacgatctcgccgagcgctatccgatggtctcggtcgcccagacgctggacaag
ctcaaggacgccggcttctactgggccacccggtccggtgtcaccaccgcgatctccgac
gtgatcgttccgccgaacaagaaggagatcctcgactcctacgaggagaaggcggaccag
gtggagaagcggtaccgccgtggtgcgctctcccacgaggagcgcaacgccgagctggtc
aaggtctggaacgccgccaaggacgacgtctccgaggcgatggagaacaacttcccggag
gacaactcgatcaacatgatcgtgaagtccggtgccgccgggaacatgtcccaggtcgtc
cagctcgccggtatgcgcggtctggtctccaacccgaagggtgagtacatcccgcgcccg
atcaagaccaacttccgcgagggtctgtcggtgctggagtacttcatctccaaccacggt
gcccgcaagggtctggccgacaccgcgctgcgcaccgccgactcgggttacctgacccgt
cgtctggtggacgtctcgcaggacgtgatcgtgcgcgagaacgactgcggtaccgaccgc
ggcatccggatgccgatcggcgagaccacgccggacggcaagctggtccgcgagcagcac
gtcgagaccagcgtctacgcgcggatgaccgccgaggacgtcaccgactccgagggcaac
atcctgctcgcccgcggctcggacctgggtgatcccgccatcgagacgttgatctcggcg
ggcgtgagcaccgtgcgggtccgcagcgtgctgacctgcgagtccggttcgggagtctgc
tcctactgctacggccgttccatggccaccggcaagctcgtcgacgtcggcgaggcggtc
ggcatcgtcgccgcccagtccatcggtgagccgggtacgcagctgaccatgcgtaccttc
caccagggcggtgtcggcggtgacgacatcacggctggtctgccgcgtgtgcaggagctg
ttcgaggcccggctgccgaagggcaaggctccgatcgccgacgcctccggccggatccgc
ctggaggacaacgaccgctactggaagatgacgctcacgccggacgacggcggcgaggac
atcacctacgacaagttgtccaagcggcagcggctcgcggtgatcaacgtgcagggcacc
gagcggcagctcgaggacggcgaccacgtcgaggtcgggcagcggctcatggagggtgcg
gtcgatccgcacgagatcctgcgcgtgctcgggccgagggaggcgcagctgcacctggtc
cgcgaggtgcaggaggtctaccgctcgcagggcgtgggcatccacgacaagcacgtcgag
gtcatcgtccggcagatgctgcgccgagtgatcatcatcgactccggtgcgaccgagttc
ctgcccggttcgccggtcgagcgggcgcagttcgagtcggagaatcggcgtgtggtctcc
gagggcggagacccggcctccggtcgtccggtcctgatgggcatcaccaaggcctcgctg
gccaccgagtcgtggctgtcggcggcctccttccaggagaccacccggatcctgaccaac
gccgcgatcgagggcgccagcgacaagctgatcggtctgaaggagaacgtcatcatcggt
aagttgatcccggccggtaccggtatcaacaagtaccgcaacatccaggtgcagccgacc
gaggaggcgcgggccgcggcctacgcgatcccgtcctacgacgacggctactacgcgccg
gacgtgttcggtcccggtaccggtgccgcagtgccgctggacgacttcgacttcgggcgc
gactaccgctga

DBGET integrated database retrieval system