Aeromicrobium chenweiae: C3E78_02665
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Entry
C3E78_02665 CDS
T05410
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aez
Aeromicrobium chenweiae
Pathway
aez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3E78_02665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aez03019
]
C3E78_02665
03009 Ribosome biogenesis [BR:
aez03009
]
C3E78_02665
Enzymes [BR:
aez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C3E78_02665
Messenger RNA biogenesis [BR:
aez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3E78_02665
Ribosome biogenesis [BR:
aez03009
]
Prokaryotic type
rRNA helicases
C3E78_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
UvrA_inter
P-loop_SecA
HEM4
CMS1
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWB91211
UniProt:
A0A2S0WIN9
LinkDB
All DBs
Position
542002..543813
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AA seq
603 aa
AA seq
DB search
MTSDLSVDTPTFADLGLVDTLVERLNALGYETPTPIQARAIPTLLEGKDVVGLAQTGTGK
TAAFALPILQKIDPKNTKTQAIVLAPTRELALQVCEAITTYAVNLPGIRVLPVYGGQGYG
FQLQGLQRGAHIVVGTPGRVIDHLERGSLDLTALEFLVLDEADEMLNMGFAEDVERILAD
TPEYKQVALFSATMPKMIRSLAKKYLHDPVDIATPKATTSTATVRQRWIQVSHHHKLDAL
TRLLEVETGDGMIVFVRTKSATEELAEKLRARGYSAAALNGDLVQAQRERTVAQLKSGQI
DLIIATDVAARGLDVERITHVINYDIPHDTEAYVHRIGRTGRAGRTGEAILFVTPRERRM
LSAIEKVSGRPVEEMSVPSAEEVNERRTGRFAQAITSSMGSPQFHAFRTLVEEYASENDV
SMTDVAAALAVMSQTDKEFFLRPDPPKKAARERDFEPRKKPAGFDRSDRLPAEGAAVYRV
AVGKRHKIGPSAIVGALANEGSLKRSDFGKITIGQDHTLVELPADLPDAVFEALANTRIS
GKLIDLQPDSGPPIRRTREDRKGNPHPKKSHENRPYPSKAPDKGSYESKGSSSGKPARKP
RHK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgacctttccgtcgacacaccgaccttcgccgacctcggcctcgtcgacacc
ctcgtcgagcggctcaacgccctcggctacgagacgcccaccccgatccaggcgcgggcg
atcccgacgctgctcgagggcaaggacgtcgtcggcctcgcacagaccggcacgggcaag
acggcagcgttcgcgttgccgatcctgcagaagatcgacccgaagaacaccaagacccag
gccatcgtgctggcgccgacccgtgagctcgcgctccaggtctgcgaggccatcaccacg
tacgcggtcaacctgcccggcatccgcgtgctgcccgtctacggcggccagggctacggc
ttccagctgcagggcctgcagcggggcgcccacatcgtcgtcggcacccccggccgcgtc
atcgaccacctcgagcgcggcagcctggacctgacggcgctggagttcctggtgctcgac
gaggccgacgagatgctgaacatgggcttcgcggaggacgtcgagcgcatcctcgccgac
acgcctgagtacaagcaggtcgcgctgttctcggccacgatgccgaagatgatccgcagc
ctggccaagaagtacctgcacgacccggtcgacatcgcgacccccaaggccaccacgtcg
accgcgacggtccgccagcgctggatccaggtctcgcaccaccacaagctcgacgccctg
acgcgcctgctcgaggtcgagaccggcgacggcatgatcgtgttcgtccgcaccaagtcc
gccaccgaggagctcgccgagaagctgcgggcccggggctactcggccgccgcgctcaac
ggcgacctggtccaggcgcagcgcgagcgcaccgtcgcccagctcaagtccgggcagatc
gacctgatcatcgcgaccgacgtggcagcccgtggcctcgacgtcgagcgcatcacgcac
gtcatcaactacgacatcccgcacgacaccgaggcgtacgtccaccgcatcggccgcacc
ggccgggccggccgcaccggcgaggcgatcttgttcgtcacgccccgggagcggcgcatg
ctgtcggcgatcgagaaggtctccgggcgtcccgtcgaggagatgtccgtcccgtcggcc
gaagaggtcaacgagcgccgcaccggtcgtttcgcccaggccatcacctcgagcatgggc
tcgcctcagttccacgcgttccgcacgctcgtcgaggagtacgccagcgagaacgacgtc
tcgatgactgatgtcgcggctgctcttgcggtgatgagccagacggacaaggagttcttc
ctgcgtcccgacccgcccaagaaggcggcgcgcgagcgcgacttcgagccgcgcaagaag
cccgcgggcttcgaccgcagcgaccggctcccggccgagggcgccgcggtctaccgcgtc
gcggtcggcaagcgtcacaagatcggcccgtccgcgatcgtgggcgccctggcgaacgag
ggcagcctcaagcgctcggacttcggcaagatcacgatcggccaggatcacaccctggtc
gagctgcccgccgacctgcccgacgcggtcttcgaggcgctcgcgaacacccgcatctcg
ggcaagctgatcgacctgcagcccgacagcggcccgccgatccgccggacccgcgaggac
cgcaagggcaacccgcacccgaagaagtcgcacgagaaccgtccctacccctcgaaggcg
ccggacaagggctcgtacgagtcgaaggggtcctcgagcggcaagcctgcgcggaagccc
cggcacaagtga
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