Aeromicrobium chenweiae: C3E78_06270
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Entry
C3E78_06270 CDS
T05410
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aez
Aeromicrobium chenweiae
Pathway
aez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3E78_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aez03400
]
C3E78_06270
Enzymes [BR:
aez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C3E78_06270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C3E78_06270
DNA repair and recombination proteins [BR:
aez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C3E78_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF2267
PknG_rubred
Motif
Other DBs
NCBI-ProteinID:
AWB91842
UniProt:
A0A2S0WKN1
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All DBs
Position
1303007..1303858
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AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGIADHVVGRTITAVTVHDVRSVRRHLPGPADFRHRVEGRTVVGVARRG
KYLWMQLDHGDAILCHLGMSGQFLVSEASAPPQRHLRITLALQDGTELRFADQRIFGGMS
FSEDGAELPPEIAHIARDPLDPLFDPAEFTARIRKRQTGVKRAILDQTLISGVGNIYADE
SLWRTPLHYARNTRHLRTREIDALLGHIGDVMREALAQGGTSFDALYVNVNGNSGYFDRS
LQAYGQEGRPCQRCGTPIRRDPFMNRSSFWCPHCQPRPRNGRF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtccgtcgcggcatcgccgaccacgtggtcggc
cggacgatcaccgccgtcacggtccacgacgtgcgctcggtgcgccgtcacctacccggc
ccggccgacttccggcaccgggtggagggacggacggtcgtcggcgtggcccgccgaggc
aagtacctgtggatgcagctcgaccatggcgacgccatcttgtgccacctgggcatgagc
gggcagttcctggtctccgaggcgtccgcgcccccgcagcgacacctgcgcatcacgctc
gcgctgcaggacggcaccgagctccggttcgccgaccagcgcatcttcggcgggatgtcg
ttcagcgaggacggcgcggagctcccgcccgagatcgcgcacatcgcgcgcgacccgctg
gaccccttgttcgacccggccgagttcaccgcccggatccgcaagcgccagacgggcgtg
aagcgggcgatcctcgaccagacgctcatctccggggtcggcaacatctatgccgacgag
tcgctgtggcggacgccgctgcactacgcccgcaacacccggcacctgcggacccgcgag
atcgacgcgttgctgggccacatcggcgacgtcatgcgcgaggcgctcgcccaaggcggc
acgtcgttcgacgcgctgtacgtgaacgtcaacggcaacagcggctacttcgaccgctcc
ctgcaggcgtacggccaggagggccggccgtgccagcggtgcggcacccccatccgccgc
gacccgttcatgaaccgctcgtcgttctggtgcccgcactgccagccgcgtccgcgcaac
gggcggttctga
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