Aeromicrobium chenweiae: C3E78_09370
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Entry
C3E78_09370 CDS
T05410
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
aez
Aeromicrobium chenweiae
Brite
KEGG Orthology (KO) [BR:
aez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aez03019
]
C3E78_09370
Enzymes [BR:
aez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C3E78_09370
Messenger RNA biogenesis [BR:
aez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C3E78_09370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
ScmC
SapB_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWB92394
UniProt:
A0A2S0WMA6
LinkDB
All DBs
Position
1949364..1952105
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AA seq
913 aa
AA seq
DB search
MSELGISSPAERYSRSRDSRQYPHLAEFRGLYDFALDGFQVEACKVVEDGHGVLVAAPTG
SGKTLVGEFAVHLAIATGRKCFYTTPIKALSNQKFADLVDRYGADNVGLLTGDNTINGEA
PVVVMTTEVLRNMLYAGSRTLDTLGYVVMDEVHYLADRTRGAVWEEVIIHLPESVSVISL
SATVSNAEEFGDWLTEVRGDTVTIVEERRPIPLHQHVMVGRKMFPLFEPSSDDRGVEVNK
ALERLAREDWQLTRMMKGHKGKGGKRPRSHNRTPSRVEVVQRLDAEGLLPAICFIFSRAG
CAAAVQQCLDARLTLTTPDEQAEIAAFVDTACSHLPEDDLHVLGYYEFRDALVRGIAAHH
AGMLPTFKECVEDLFSNGLVKVIFATETLALGINMPARSVVIEKLSKWNGETHANITPGE
YTQLTGRAGRRGIDVEGHGVVLWQHGLDPKQVAGLASTRTYPLNSSFHPSYNMAVNLVGQ
VGRGVARELLEQSFAQFQADRAVVGLARQIRKADDALEGYRENIACDRGDFMEYASLRRE
LSDIEASGSKARRQAEREEIIASLVKLRPGDVIHVPVGKFAGLAVVLDPGRVTDNEGPRP
MVLTANRHARRLAMIDFPAPVQALTTMRIPKSFNPRNPQARRDLASALRSRADAASFHRD
KPYRDQPGREDPRIAAIRQKLREHPCHDCPDRETHARWAERYLKLERDTRNQRGRIEQRT
NTVARQFDRVCEVLDVLGYLDGDEVTPDGLRLKRLYSDLDLLVSECLRQGTWDGLDAAEL
AAVVSVLTYTSRLADELPAPRFPTKNVRETAETMAHLCADLQQLEREHRVKFLRSPDFGF
SQAVWSWCKDATLDDVLNDMELAAGDFVRAMKQLIDVVAQIADAAGPGPLRTTAREALDL
LRHGVVSYTSITA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcttggcatttcgtccccggccgagcggtactcacgatcgcgtgacagccgg
cagtacccgcacctggccgagttccgcggcctctacgacttcgccctcgacggtttccag
gtcgaggcctgcaaggtcgtcgaggacgggcacggtgtgctggtcgccgcacccaccggc
tccggcaagacgctggtgggggagttcgccgtccacctcgcgatcgccaccggccgcaag
tgcttctacaccacgccgatcaaggcgctgtccaaccagaagttcgccgatctcgtcgac
cgctacggcgccgacaacgtcggcctgctgaccggcgacaacacgatcaacggcgaggcc
cccgtcgtcgtgatgacgaccgaggtgctgcgcaacatgctgtacgccggctcgcgcacc
ctcgacacgctcggctacgtcgtgatggacgaggtccactacctcgccgaccgcacccgc
ggagccgtgtgggaggaggtcatcatccacctgcccgagtcggtgtcggtgatctcgctg
tcggcgaccgtgtcgaacgccgaggagttcggcgactggctgaccgaggtccgcggcgac
accgtcacgatcgtcgaggagcgccgcccgatcccgttgcaccagcacgtgatggtcgga
cgcaagatgttccccctgttcgagccgagctcggacgatcgcggggtcgaggtcaacaag
gcgctggagcggctcgcccgcgaggactggcagctgacgcgcatgatgaagggccacaag
ggcaagggcggcaagcggccccgcagccacaaccgcacgcccagccgggtcgaggtcgtc
cagcggctggacgccgagggcctcctgcccgcgatctgcttcatcttcagccgggccggc
tgcgcggcggcggtgcagcagtgcctcgacgcccggctgaccctgacgacccccgacgag
caggccgagatcgccgcgttcgtggacaccgcctgctcgcacctgcccgaggacgacctc
cacgtcctgggctactacgagttccgcgacgcgctcgtgcggggcatcgcggcgcaccac
gccgggatgctgccgacgttcaaggagtgcgtcgaggacctgttcagcaacgggctggtc
aaggtcatcttcgcgaccgagacgctcgcgctgggcatcaacatgccggcccggtcggtc
gtcatcgagaagctgtcgaagtggaacggtgagacccacgccaacatcacgccgggggag
tacacccagctcacgggccgagccggtcgtcgtggcatcgacgtcgagggccacggcgtg
gtcctgtggcagcacgggctggaccccaagcaggtggccgggctcgcgagcacgcggacg
tacccgctcaactcctcgttccacccgtcgtacaacatggcggtcaacctcgtgggccag
gtcgggcgcggcgtcgcccgcgagctgctcgagcagtccttcgcccagttccaggccgac
cgtgcggtcgtcgggctcgcccgtcagatccgcaaggccgacgacgcactcgagggctac
cgcgagaacatcgcctgcgaccgcggggacttcatggagtacgcgtcgttgcgtcgcgag
ctcagcgacatcgaggcgtccgggtccaaggcccggcgccaggccgagcgcgaggagatc
atcgcctcgctggtcaagctgcgccccggtgacgtgatccacgtaccggtcggcaagttc
gccggcctggcggtcgtcctcgaccccggacgggtcaccgacaacgagggaccgcgcccc
atggtgctgacggccaaccggcacgcgcggcggctcgcgatgatcgacttcccggcaccg
gtgcaggcgctgacgacgatgcgcatccccaagtcgttcaacccccgcaacccgcaggcc
cgccgcgacctcgcgtccgccctgcgcagccgtgccgacgcggcgtcgttccaccgggac
aagccctaccgggaccagcccggccgggaggacccgcgcatcgcggcgatccgccagaag
ctgcgcgagcacccgtgccacgactgccccgaccgcgagacccacgcccggtgggccgag
cggtacctcaagctggagcgggacacccgcaaccagcgcggccgcatcgagcagcgcacg
aacacggtcgcccggcagttcgaccgggtctgcgaggtgctcgacgtgctcggctacctc
gacggcgacgaggtcaccccggacggtctgcggctcaagcggctctacagcgacctggac
ctgctggtcagcgagtgcctgcgtcagggcacgtgggacggcctggacgcggccgagctg
gccgcggtcgtcagcgtcctgacgtacacgtcgcggctggccgacgagctgccggcgccc
cgcttcccgaccaagaacgtgcgggagaccgccgagacgatggcgcacctgtgcgccgac
ctgcagcagctcgagcgcgagcaccgggtcaagttcctgcgctcaccggacttcggcttc
tcgcaggcggtgtggtcctggtgcaaggacgccacgctcgacgacgtcctgaacgacatg
gagctcgccgcgggcgacttcgtccgggcgatgaagcagctgatcgacgtcgtcgcccag
atcgccgacgccgccggccccggcccgctgcgcacaaccgcccgcgaggcactcgacctg
ctgcgccacggcgtcgtcagctacaccagcatcaccgcctga
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