Aeromicrobium chenweiae: C3E78_09890
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Entry
C3E78_09890 CDS
T05410
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
aez
Aeromicrobium chenweiae
Brite
KEGG Orthology (KO) [BR:
aez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aez03036
]
C3E78_09890 (xerD)
Chromosome and associated proteins [BR:
aez03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C3E78_09890 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AWB92485
UniProt:
A0A2S0WMD2
LinkDB
All DBs
Position
complement(2044646..2045575)
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AA seq
309 aa
AA seq
DB search
MSEDVARGVQDYLSHLGVERGLADNTLQSYRRDLRRYLAFLGSRELTDPAAITENDVTAF
LGELRTGDPDHVALGTASAARTIVAVRGLHRFWLREQVVPTDVTAAIRPPRPAARLPKAL
PLSDIESLLDAAGSPGTTLAARDRALLEVLYGTGARISEAVGLDIDDLDLEDSTVLLRGK
GGKQRIVPLGSYAKASLADYLAVSRPALVSSRTGTPAVFLNARGGRLSRQSAWTVLTKAA
ERAGIGVEVSPHTLRHSFATHLLDGGADVRVVQELLGHASVTTTQIYTLVTVEKLREIYA
TAHPRAARQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggacgtggctcgaggtgtccaggactacctcagccacctgggcgtcgagcgc
ggcctcgcggacaacacgctgcagtcctaccgccgtgacctgcgtcggtacctcgcgttc
ctcggctcacgagagctgaccgatcccgcggcgatcaccgagaacgacgtcaccgcgttc
ctgggggagctgcgcacgggcgaccccgaccacgtcgcgctcgggacggccagcgccgcc
cggacgatcgtggccgtgcgcgggctgcatcgcttctggctccgcgagcaggtcgtgccg
accgacgtgacggccgccatcaggccgccgcgacccgcggccaggctgcccaaggcgctc
ccgttgtccgacatcgagtcgctgctcgacgcggccggctcgccgggcacgaccctcgcc
gcacgggaccgggccctgctcgaggtgctgtacggcacgggtgcccggatctccgaggcg
gtcgggctcgacatcgacgacctcgacctggaggactccacggtcctgctccgcggcaag
ggcggcaagcagcggatcgtgcccctgggctcctacgccaaggcgtccctcgccgactac
ctggccgtgtcccgcccggcgctggtctcctccaggaccgggacgccggcggtgttcctg
aacgcccgtggcgggcgcctgtcgcgccagagcgcctggaccgtgctgaccaaggccgcc
gagcgcgccggcatcggcgtcgaggtctccccgcacacgctgcgccactcgttcgcgacg
cacctgctcgacggcggcgcggacgtccgcgtcgtgcaggagctgctcggtcacgcctcc
gtcaccaccacgcagatctacacgctggtgaccgtggagaagctgcgggagatatacgcc
acagcccatccacgtgccgcccggcaatga
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