Aeromicrobium chenweiae: C3E78_14990
Help
Entry
C3E78_14990 CDS
T05410
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aez
Aeromicrobium chenweiae
Pathway
aez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3E78_14990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aez03021
]
C3E78_14990
03400 DNA repair and recombination proteins [BR:
aez03400
]
C3E78_14990
Enzymes [BR:
aez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3E78_14990
Transcription machinery [BR:
aez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3E78_14990
DNA repair and recombination proteins [BR:
aez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3E78_14990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
XS
Motif
Other DBs
NCBI-ProteinID:
AWB93415
UniProt:
A0A2S0WPZ6
LinkDB
All DBs
Position
complement(3088481..3092299)
Genome browser
AA seq
1272 aa
AA seq
DB search
MLDVNFFDQIRIGLATADDIRGWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITKVDEDARHQDLSSLEAKIDLERKQLESRRDNEVNERMQKLEED
LAALEAEGAKADAKRKVKDSAEREAKQRRDRAQREIDRLDEVWSRFKNLKVQDLEGDEML
YREMTYRFGKYFEGYMGAMAIQKRLQDFDLEAEAELLREIIATGKGQKKTRALKRLKVVS
AFLGSNNAPAGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSTNNILKPSDGRPVTMPTQDMIIGLYFLTLERSGHIGEGR
AFSTVPEALMAFERHEISLQSHIKIRIEGQILDTTLGRAIFNEALPDDYPFVNHQVGKKE
LGVIVNDLAERYSKVDVANALDNLKDTGFHWGTRSGVTVSIEDVVTPPRKQEILGGYETQ
AAKVQTQFDRGLITEDERRQELIEIWTQATADVTEEMLKGFTEDNPIWMMVDSGARGNMM
QVRQIAGMRGLVANPKGEIIPRPIKANFREGLSVVEYFIATHGARKGLADTALRTADSGY
LTRRLVDVSQDVIIREEDCGTERGLKQVIATKLDDGRLVAAENVETAAYSRTAATDITDA
DGKVLVAAGGELGDVEIAQLIAAGVEEIKVRTVLTCEAKAGTCAKCYGRSLATGKLVDIG
EAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVVELFEARQPKGKAPITESAG
RVVIDDSDKTRKLVVTPDDGSDVLEYPVTKRARLLVQDGDHVEVGQMLTHGTPDPQEVLR
ILGVRRAQEHLVDQVQEVYRSQGVAIHDKHIEIIVRQMLRRVTVIEQGDAQLIPGDLVDR
AHFEEENRRVVAEGGTPASGRPVLMGITKASLAVESWLSAASFQETTRVLTDAAIHGKSD
SLRGLKENIIIGKLIPAGTGLDRYRNIRVEPTEEARQAAYAVTGYGDYDYGFGSADGDAV
KLDDFDFTSYDS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgtgaacttcttcgatcaaatccggatcggtctcgcgaccgccgacgacatc
cgcggatggtcgttcggcgaggtcaagaagcccgagacgatcaactaccgcacgctcaag
cccgagcgtgacggactcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacgcggtccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtcacgcacatctggtacttcaagggtgtgcccagccggctcggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgaaggtcgac
gaggacgcacgtcaccaggacctgtcgagcctcgaggccaagatcgacctcgagcgcaag
cagctcgagagccgtcgtgacaacgaggtcaacgagcgcatgcagaagctcgaggaggac
ctcgcggccctggaggccgagggtgccaaggccgacgccaagcgcaaggtcaaggactcg
gccgagcgcgaggccaagcagcgtcgtgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctcgagggcgacgagatgctc
taccgcgagatgacgtaccgcttcggcaagtacttcgagggctacatgggcgccatggcg
atccagaagcgcctgcaggacttcgacctcgaggccgaggccgagctgctgcgcgagatc
atcgccaccggcaagggacagaagaagacccgcgccctcaagcgcctcaaggtcgtctcc
gcgttcctcggcagcaacaacgcgccggccggcatggtcctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggtccagctcgacggtggacgtttcgcgaccagcgacctg
aacgacctctaccgccgcgtgatcaaccggaacaaccggctcaagcgtctgctcgacctg
ggcgctccggagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgtcgcggccgtccggtcaccggaccgggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggtcgcttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgtggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagtgccaagcgcatggtcgagcgggctcgc
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgc
gcgccgacgctgcaccgcctgggcatccaggccttcgagccgcagctcatcgagggcaag
gccatccagatccacccgctcgtctgctcggcgttcaacgccgacttcgatggtgaccag
atggccgtgcacctgccgctgagcgccgaggcccaggccgaggcacgcgtcctgatgctg
tcgaccaacaacatcctgaagccgtccgacggccggcccgtgaccatgcccacccaggac
atgatcatcggcctgtacttcctgacgctggagcgttcgggtcacatcggcgagggtcgc
gcgttcagcacggtccccgaggcactcatggcgttcgagcgtcacgagatctcgctgcag
agccacatcaagatccgcatcgagggccagatcctcgacacgaccctgggtcgtgcgatc
ttcaacgaggcgctgccggacgactaccccttcgtcaaccaccaggtgggcaagaaggag
ctgggtgtgatcgtcaacgatctcgccgagcgctactccaaggtcgacgtcgccaacgcg
ctggacaacctcaaggacaccggcttccactggggcacccgctccggcgtgaccgtgtcg
atcgaggacgtcgtcacgcctccgcgcaagcaggagatcctgggcggctacgagacgcag
gcggccaaggtccagacgcagttcgaccgcggtctcatcaccgaggacgagcgtcgtcag
gagctcatcgagatctggacgcaggccacggccgacgtcaccgaggagatgctcaagggc
ttcaccgaggacaacccgatctggatgatggtcgactccggtgctcgcggaaacatgatg
caggtccgtcagatcgccggcatgcgtggtctggtggccaacccgaagggcgagatcatc
cctcgcccgatcaaggccaacttccgtgagggcctgtcggtcgtcgagtacttcatcgcg
acccacggcgcccgcaagggactcgcggacaccgctctgcgtacggccgactcgggctac
ctgacgcgtcgactcgtcgacgtcagccaggacgtcatcatccgcgaggaggactgcggc
accgagcgcggtctgaagcaggtcatcgcgaccaagcttgacgacggccgtctggtcgcc
gccgagaacgtcgagacggctgcctactcgcgcaccgcggccaccgacatcaccgatgcc
gacggcaaggtcctcgtggccgccggcggcgagctcggtgacgtcgagatcgcgcagctc
atcgctgcgggggtcgaggagatcaaggtccgtacggtcctgacgtgcgaggcgaaggcc
ggcacgtgtgccaagtgctacggtcgctcgctcgcgaccggcaagctcgtcgacatcggc
gaggccgtcggaaccatcgcggcccagtcgatcggtgagcccggcacgcagctgaccatg
cgtaccttccacaccggtggtgtggccggtgacgacatcacgcacggtctgccccgcgtc
gtcgagctcttcgaggctcgccagcccaagggcaaggctcccatcacggagtcggccggc
cgcgtcgtcatcgacgactcggacaagacccgcaagctcgtcgtgacgccggatgacggc
tcggacgtgctcgagtaccccgtcaccaagcgtgcgcgcctcctggtccaggacggcgat
cacgtcgaggtcggacagatgctgacgcacggcacgcccgatccgcaggaagtcctgcgc
atcctgggtgtccgtcgtgcccaggagcacctggtcgaccaggtgcaggaggtctaccgg
tcgcagggcgtggcgatccacgacaagcacatcgagatcatcgttcgccagatgctgcgt
cgggtcacggtcatcgagcagggcgacgcccagctcatccccggtgacctggtcgatcgt
gcgcacttcgaggaggagaaccgtcgggtcgtcgccgagggtggcacccccgcctcgggt
cgtccggtcctgatgggcatcacgaaggcctcgctggccgtcgagtcgtggctgtcggcc
gcctccttccaggagacgacgcgcgtcctcaccgacgccgccatccacggcaagtcggac
tcgctgcgtggcctgaaggagaacatcatcatcggcaagctcatcccggcgggtaccggt
ctcgaccgttaccgcaacatccgggtcgagcccaccgaggaggcccgtcaggccgcctac
gccgtcaccggctacggcgactacgactacggcttcgggtcggctgacggcgacgcggtg
aagctggacgacttcgacttcacgtcgtacgactcctga
DBGET
integrated database retrieval system
