KEGG   Alcaligenes faecalis ZD02: UZ73_01225
Entry
UZ73_01225        CDS       T04157                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
afa  Alcaligenes faecalis ZD02
Pathway
afa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:afa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    UZ73_01225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afa03021]
    UZ73_01225
Transcription machinery [BR:afa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     UZ73_01225
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 PhyR_sigma-like Sigma70_ECF GerE HTH_IclR HTH_40 EutK_C
Other DBs
NCBI-ProteinID: ALO37001
LinkDB
Position
complement(264124..264639)
AA seq 171 aa
MNTPMSDKLSVMTVETLYCHHHGWLQGWLRRKLGNSNDAADIAQDTFVRILASRSFSSGF
GSEPRALLTHIAKGLLVDHWRRKSVEEAYLEAIAHLPAVHVPSPETRLIIIEALMRIDTM
LASLTPRTREVFLLAQLHGMTLAQIAEHMKMPLITVRRYIQKALVACAAVA
NT seq 516 nt   +upstreamnt  +downstreamnt
atgaatacgcccatgtccgacaagctatccgtgatgacggttgaaacgctctattgccat
catcatggctggctgcagggctggctgcgccgcaagctgggcaatagcaacgatgccgct
gatattgcgcaggacacctttgtgcgcattttggcatcacgctcattttcttcaggtttt
ggcagtgaaccgcgagccttgctcacgcatatcgcgaaaggcttgctggtcgatcactgg
cgcagaaagtcggtggaagaggcttatctggaggcgattgctcaccttcctgctgtgcat
gtgccatccccggaaaccaggctgatcatcatcgaggccttgatgcggattgacaccatg
ctggccagcctgacgccgcgcactcgggaggtgtttttgctggcacaactgcatggcatg
acgctggctcagattgccgagcatatgaagatgcccttgattacggtgcgtcgctacatc
cagaaagcgctggttgcctgcgcggcggttgcgtag

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