Alcaligenes faecalis ZD02: UZ73_03280
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Entry
UZ73_03280 CDS
T04157
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
afa
Alcaligenes faecalis ZD02
Pathway
afa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UZ73_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afa03019
]
UZ73_03280
03009 Ribosome biogenesis [BR:
afa03009
]
UZ73_03280
03036 Chromosome and associated proteins [BR:
afa03036
]
UZ73_03280
Enzymes [BR:
afa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
UZ73_03280
Messenger RNA biogenesis [BR:
afa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UZ73_03280
Ribosome biogenesis [BR:
afa03009
]
Eukaryotic type
90S particles
RNase
UZ73_03280
Prokaryotic type
rRNA processing factors
UZ73_03280
Chromosome and associated proteins [BR:
afa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
UZ73_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALO37376
UniProt:
A0A0A2N331
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All DBs
Position
complement(704315..705073)
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AA seq
252 aa
AA seq
DB search
MKRLALLEAAIGYSFKDTGLLEQALTHRSHSARHNERLEFLGDSVLNFTVAALLFDRFQR
IDEGDLSRLRANLVKQAALAEIATRLGLSDYLRLGEGELKSGGFRRPSILADALEAIFGA
VFLDAGFTQAQTVITQLYEPMLVDVDPKTLGKDPKTLLQELLQGRKLDLPVYTVVATHGA
AHDQLFDIECTIAKLNIHVRASGSSRRAAEQAAATQAIAILEAEFPAKTTRASRHRRPSQ
LTLPVAVSQETE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcttgctctgcttgaagccgctatcggctactcctttaaagacacaggcctg
cttgagcaggccttgacccatcgtagccacagcgcgcgtcataacgagcggctggagttc
ctgggcgattcggtcttgaacttcacggttgcggccttgttgttcgaccgctttcaacgc
attgatgaaggcgacttgtcgcgcctgcgagcgaatctggtcaaacaggctgctctggct
gaaatcgcaacccgtctgggtttgtcggattatttgcgtctgggggaaggggagctgaaa
agcggtggtttccgccgtccttccattctggccgatgcgctggaagcgatttttggcgct
gtctttctggacgcgggctttacgcaagcccaaaccgtcatcacccagctgtatgaaccc
atgctggtggatgtggaccccaagacattggggaaagatcccaaaaccttgctgcaggag
ctgctgcaaggtcgcaagctggatttgccggtgtacaccgtggtggccactcatggcgca
gcccacgatcagctcttcgatatcgaatgcacgatcgccaagctcaatatccatgtccgt
gccagtggcagcagccgtcgtgctgctgagcaagccgccgcaacgcaggccattgctatt
ttggaagctgaatttccagccaagacgacgcgcgccagtcgccatcgtcgcccctcacaa
ttgacattgcccgtggccgtgtcgcaggaaacagaatga
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