Alcaligenes faecalis ZD02: UZ73_05455
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Entry
UZ73_05455 CDS
T04157
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
afa
Alcaligenes faecalis ZD02
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afa03000
]
UZ73_05455
Transcription factors [BR:
afa03000
]
Prokaryotic type
Helix-turn-helix
Other families
UZ73_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
PAS
AAA_5
PAS_8
Mg_chelatase
PAS_9
HTH_50
HTH_30
AAA
AAA_2
HTH_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALO37757
LinkDB
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Position
complement(1198620..1200536)
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AA seq
638 aa
AA seq
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MPYPSSPPARLRLVAFGLHGLRSLLEELVPQFRAQAEILIVDKAYGEAVEAVQVLRQTGE
IDVLVSAGSNGSYLREHLDLPVVLVHPGGFDIMGSLASAQAERKAVVTYGEMPLELMEFV
QRFDLPVELRSYRSEADARSCVQDLKELGVEWVLAPGLVVDLARENQMEGVLLYSQGAVR
QALESAIELARVARAEAARRDRLNTILAQLRDGVVSVDRDERIETVNPAMEAWLGQPAQA
MIGRRLGSLYPELDLAGTLRSLDVQLDTVQQVGGRTAIVTRMPILEQGRLSGAVLLCQDP
AAIQRLDRSLRSRSQQAASRHARYELSDLVGQSSPMRKLRAQAQACAQSTATTLIIGESG
TGKELLAQGIHSASARRAQPFVAVNCAAFPDSLLESELFGYVEGAFTGSSRGGKVGLVEA
AHTGTLFLDEIGEMPLPLQTRLLRVLQEKEVLRIGAIEPTPVDVRVIAATHRDLAAQVKE
GVFRQDLFYRLNILVLRLPPLRLRTQDLPELVEHLLAKVAQRLGGAVTLNPDWLTELLEL
GRHYIWPGNIRELENLIERLMVLGTVQGDQAVVLEDIAPELRAVVAEQPAMPALRDQQER
SEQEHLAKVLEECGGNRALAAQQLGISRSTLWRKLRKG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccttatccttcttctcctcctgcccgtctgcgtctggtggctttcggactgcatgga
ctgcgttctcttctggaagaactggtgccgcagttccgcgcccaggccgaaatactgatc
gtggacaaagcctatggcgaggccgtagaagccgtgcaggtgttgcgacaaacaggtgaa
attgacgtgctggtgtctgcgggttccaacggcagttatttgcgcgaacatctggacctg
ccggtggtactggtacatcccggtggctttgacattatgggcagtctggcctcggcacag
gccgagcgcaaagccgtggtgacttacggcgaaatgccgctggaactgatggagttcgtc
cagcgttttgatctgcctgtggagctacgcagctatcgcagcgaggctgatgcgcgtagc
tgtgtccaggatttgaaagagctgggagtggagtgggtgctggcacccggcctggtggtg
gatctggcgcgtgagaaccagatggaaggtgtgctgttgtattcacaaggagcggtgcga
caggccctggaatcggctatcgaactggcccgtgttgctcgcgccgaagcagcccgtcgg
gatcgcctgaatacgattctggcgcagttgcgtgacggtgtggtgtcagtggacagggac
gaacgcattgaaacggtgaacccggcgatggaagcctggttggggcaaccggctcaagcc
atgattggccgccgcttgggttccttgtatcccgagctggatctggccggcacgctgcgc
agtctggacgtgcagttggatacggtgcaacaagtgggtggccgtaccgcgattgtcacc
cgcatgccgattctggagcaggggcgcttgagcggggcggtgttgctctgccaggacccg
gccgcgattcaacgactggaccgcagcttgcgttcgcgcagtcagcaagcggcatcgcgt
catgctcggtacgagctgtctgatctggtgggacagagctcgcccatgcgcaagttgcgt
gctcaggctcaggcttgtgcgcaaagcacagccacaaccttgattattggtgaaagcggt
acgggtaaggagttgctggcccaaggcattcacagcgccagcgccagacgcgcgcaaccc
tttgtggccgtgaactgcgcggctttccctgacagcctgttggaaagcgaactgttcggt
tatgtggaaggcgccttcacaggctccagccggggcggcaaagtcgggctggtggaagcg
gctcacaccggcaccttgtttctggacgagatcggggaaatgcccttgccactgcaaacc
cgtttgctacgggtgctgcaagaaaaagaagtcctgcgtatcggggcgattgagccaacg
ccagtcgatgtgcgcgtgattgcggccactcatcgcgatctggccgcgcaggttaaagaa
ggcgtgttccgtcaggacctgttttatcgcctgaatattctggtgctgcgcttgccgcct
ttgcgtttgcgcacacaggatttgccagaactggtggagcatctcctggcaaaagtggct
caacgtctgggtggggctgtaacacttaacccggattggctgaccgagctgctggaactg
ggccgtcactacatctggcccggcaatatccgtgagttggaaaacctgatcgaacgcttg
atggtcctgggcacagtgcaaggcgatcaggctgtggtactggaagatattgcgccggag
ctgcgggcagtggtggcagagcagcccgctatgccagcgctgcgtgatcagcaagagcgc
agcgagcaggagcatctggccaaggtgctggaagagtgtggcggtaaccgtgctcttgca
gcccagcaactggggatcagccgcagtacgttgtggcggaagttgcgtaaaggctga
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