Alcaligenes faecalis ZD02: UZ73_06765
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Entry
UZ73_06765 CDS
T04157
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afa
Alcaligenes faecalis ZD02
Pathway
afa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UZ73_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afa03019
]
UZ73_06765
03400 DNA repair and recombination proteins [BR:
afa03400
]
UZ73_06765
Enzymes [BR:
afa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UZ73_06765
Messenger RNA biogenesis [BR:
afa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UZ73_06765
DNA repair and recombination proteins [BR:
afa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UZ73_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALO37985
LinkDB
All DBs
Position
complement(1500526..1502352)
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AA seq
608 aa
AA seq
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MAQSALEVLQEVFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRPGTG
VVVSPLIALMQDQVDALNELGVNAAYLNSTQDWQTAREVEREFLTGQLDLLYVAPERLLT
DRCLDLLARGQISLFAIDEAHCVSQWGHDFRPEYLGLDLLAQRWPGVPRVALTATATQLT
RVEIAQRLKLEEARHFVASFDRPNICYRIIEKNEVRKQLLSFIQEEHSGDAGIVYCLSRS
RVEDTAEFLCKNGIHALPYHAGLDAQQRAINQARFLREEGVVMVATIAFGMGVNKPDVRF
VAHIDLPKSVEGYYQETGRAGRDGEAATAWLAYGLQDVVQLYRMINQSQGDAAHRRQQGQ
ALDAMLGLCETISCRRQRLLAYFDQQIEPCGNCDTCLEAPEAWDGTVAAQKMLSTIYRLW
RERGQRFGAGHLIDILLGKLTDRVKEHEHDKLTVFGVGKELTDQAWRGVLRQLLAHSLVK
VDPEGYGTLLLTEASREVLKGERTLMLRRETVTRGPAAHRVKGQAPAGPALEPDQQRRFE
ALRAWRAATAREHGVPAYVIFHDATLREVAIRCPSSEADLEPITGIGVRKREAYGEALLR
CVQEFQTQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcagcacttgaggttcttcaggaagtttttggttatgacagttttcgtggc
tctcagcacgagattatcgagaccctgatccaaggcggtgacgccctggtcttgatgccc
accggcggcggcaagtcgctgtgttaccagattcctgctttggtgcgccccggcaccggc
gtagtcgtgtcccccttgatcgccctgatgcaggatcaggtggacgcgctcaatgaattg
ggcgtgaacgccgcctatctgaactccacccaggattggcagaccgcccgcgaggtcgag
cgcgaatttctgacggggcagctggatctgctctatgtggcgcccgagcgcctgctgaca
gaccgctgcctggatttgctggctcgtggtcagatttccctgtttgccattgatgaagcc
cactgtgtatcgcaatggggccacgatttccgcccggagtatctgggcctggatttgctg
gctcagcgctggccgggtgtgccacgggttgccctgacggcaactgccactcagttgacg
cgggtagaaattgcccagcgcctgaagctggaagaggcccggcattttgtcgccagtttt
gatcgccccaatatttgctatcgcattatcgaaaagaacgaggtgcgcaagcagctcttg
agcttcattcaggaagaacactcgggcgatgcggggattgtgtattgtctgtcgcgctcg
cgcgtggaagatacggccgagtttctctgcaagaacggtatccatgccttgccctaccat
gcggggctggatgcgcagcaacgcgccatcaaccaggcccgctttcttcgagaagaaggg
gtggtcatggtggcgaccattgcgtttggcatgggcgtcaacaaaccggatgtgcgtttt
gtggcccacatcgacctgcccaaatcggtagaggggtattaccaggaaaccggacgggca
gggcgcgatggtgaagcggctacggcctggctggcctatggcctgcaagacgtggtgcag
ttgtaccgcatgattaaccagtcgcagggcgatgcggcccaccgacgccagcaaggccag
gcgctggatgccatgttgggtctgtgcgaaaccatttcctgccgccgtcagcgcttgctg
gcgtatttcgatcagcagatcgagccttgcggtaattgcgatacttgcctggaagcaccg
gaagcctgggacggtacggtggccgcgcaaaaaatgctgtccactatctatagattgtgg
cgcgagcgtggtcagcgtttcggggccggccatctgatcgatattctgctgggcaagctg
acggatcgtgtcaaagagcacgagcacgacaagctcactgtctttggtgtgggcaaagag
ttgaccgatcaagcctggcgcggagtactgcgccagttgctggcacatagtctggtcaag
gtggacccggaagggtacggcaccttgttgctgaccgaggccagccgcgaagtgcttaaa
ggggaacgcactttaatgctgcggcgcgaaaccgtaacacgcggaccggctgctcaccga
gtaaaaggtcaggcgcctgccgggcctgctctggaacccgatcaacagcgacggttcgag
gctttgcgtgcctggcgtgccgcgaccgctcgcgagcatggcgttcccgcctacgtcatt
ttccatgatgccacgttacgtgaggtagccatccgctgccccagctcagaggctgatctg
gagccgattacaggcattggcgtacgcaaaagagaagcctacggcgaggctttgctgcgc
tgcgttcaagagttccagacgcaatag
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