Alcaligenes faecalis ZD02: UZ73_13735
Help
Entry
UZ73_13735 CDS
T04157
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
afa
Alcaligenes faecalis ZD02
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afa03016
]
UZ73_13735
Enzymes [BR:
afa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
UZ73_13735
Transfer RNA biogenesis [BR:
afa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UZ73_13735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
UPF0158
Motif
Other DBs
NCBI-ProteinID:
ALO39228
LinkDB
All DBs
Position
complement(3041496..3043385)
Genome browser
AA seq
629 aa
AA seq
DB search
MYVLFEDSGNFKAEKIFSDSDTTMQVESASGKRSKIKKNSVLFTFEQPAPAELLEKAQAL
AESLDINFLWECAPQDEFEASTLAQEYFGHAPSAIEKTGTIFALHSAPAYFHRRGKGLYR
PAPPEILQAALAAIEKKRLQQEQIQAWAEQMIKGELPPAVAEKAGTFLTQPDKNTLEWKA
FDQAQKELGVSTEKLLLSLGAWSNPLTLHQHRFLAAHFPKGTGFPAISLQSWGQNLPEAN
VTAYSVDDANTIEIDDALSVQHPAPGRLRIGVHIAVPSLALARGNEIDQIARNRMATVYT
PGYKIPMLPPELIAHFSLDQGQTRPTLSLYVDADISTGEILSHQTRLERITVAGNLRQHE
LDPLISEEALADENAELPYAQWLRPLWNFSRQLSAQREAVRGKPENNNRVEYSFELDGPH
DDPNSIIRLVPRVRNAPLSLLVAEYMILANQLWGGLLAEHNVPGIYRSQQFMRTRMSTTP
GPHESIGVPQYIWSTSPLRRYVDLINQGQILAAAEHGISARLAAPFQPKDADLYAIIGAF
ESQYTQWSDYQSSLERFWCLRWLQQNDIKQVQASFIKEDLVRLTNAPLVLHVPGLPALER
GQEVTLDLLSFDELALTVEARLRSVATAD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcctttttgaagacagcggtaatttcaaagcagaaaaaatattttctgacagc
gataccaccatgcaggtggaatccgcgtctggcaaacgcagcaaaataaagaaaaacagc
gttctatttaccttcgagcagcccgccccggcagaattgctggaaaaggcccaagcgctg
gccgaatccctggatatcaattttttgtgggaatgcgctcctcaggacgaatttgaggct
tccacgctggcacaagagtattttggccatgcgcccagcgctatcgaaaagaccggcacc
atctttgccctgcacagcgcacctgcctactttcaccgtcgtggcaaagggttgtaccgc
cctgccccgccagaaattttgcaagcagccctggccgccattgagaaaaaacgcctgcag
caagagcaaatccaggcctgggccgaacaaatgatcaagggcgaactgccgcccgcagtt
gccgagaaggccggtaccttcctgacccagccggacaagaacacactggagtggaaagcc
tttgatcaggcccagaaagagctgggtgtcagcacggaaaaactgctgctgtcgctgggt
gcctggtccaatccactgactttgcatcaacatcgctttctggcggcgcacttccccaaa
ggcacaggctttcccgccatttccctgcaaagctggggtcagaacctgcccgaggccaat
gtcaccgcctactcggttgacgacgccaatacgattgagattgacgacgcgctatccgtc
cagcacccggcgccaggccgcctgcgtatcggggttcacattgccgtgccttcgctggcc
ttggctcgtggcaacgagatcgaccagattgcccgcaatcgcatggcaacggtatacaca
ccgggctacaagatccctatgctgccgcccgagctgatcgcgcatttctccctggatcaa
gggcagactcgtcctaccctgtcgctgtatgtagacgccgacatcagcactggtgaaatc
ctgtcgcatcagactcgtctggaacgcattaccgtggcgggcaacctgcgccaacacgag
ctggacccgctcatcagcgaagaagctctggccgacgaaaacgccgaactgccctatgca
caatggctgcgcccgctatggaatttctcgcgccagttgtcggcccagcgtgaagccgtg
cgtggcaaaccggaaaacaataaccgtgtggaatacagcttcgagctggatggcccgcac
gatgatccaaactccatcattcgtctggtgccacgcgtgcgcaatgcgccgctaagcctg
ctggtggctgaatacatgattctggccaatcagttgtggggtggtttgctggccgagcac
aatgtgcccggcatttatcgctcccagcagttcatgcgtacgcgcatgtccaccacgccc
ggcccgcacgaatccattggtgtgccgcaatacatctggtccacctcgcccctgcgccgt
tatgtggacctgatcaatcagggccagatcctggcagccgccgagcatggaatttctgca
cgtctggccgcccccttccaacccaaagatgcggatttgtacgccattattggtgccttt
gaatcgcaatacacgcagtggtcggactaccagtcctctctggagcgtttctggtgcctg
cgctggctgcaacaaaacgacatcaagcaggtacaggccagcttcatcaaggaagatctg
gtgcgcctgaccaatgcgccgctggttctgcacgttcctggcctgcctgcactggagcgg
ggtcaggaagtgacgctggatctgctgtcctttgacgagctggctttgacggtagaagcc
cgtttgcgctcggttgccacggctgactga
DBGET
integrated database retrieval system
