Alcaligenes faecalis ZD02: UZ73_14915
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Entry
UZ73_14915 CDS
T04157
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
afa
Alcaligenes faecalis ZD02
Pathway
afa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UZ73_14915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afa03021
]
UZ73_14915
Transcription machinery [BR:
afa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UZ73_14915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
DUF8048
HRI2_3H
DUF6930
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
ALO39444
LinkDB
All DBs
Position
3306387..3306911
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AA seq
174 aa
AA seq
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MSPTSSPSDFASSDEFVSLYREHHGWLVQMLRRRLSGNTDHAADLAHDTFERVIRSQSTA
VFTEPRGFLTTVAKRLLIDQWRRQAIEQAYLETLAVRSVDVEPSPETHALVVEALDSVCR
MMEQLPARVRKVFVLVQVKGLAYQQVAQTLGISVQSVQRDMVKAWQHCYAVLYT
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgacctccagcccttccgatttcgcttcttctgacgagttcgtcagcctgtac
cgtgagcatcacggctggctggtgcagatgttgcgtcgtcggcttagcggcaatacggac
catgctgccgacctggcgcatgacaccttcgagagggtgattcgcagtcaatccaccgct
gtctttaccgagcctcgtggatttctgacgacggtagccaagcgtttgctgatcgatcag
tggcgcaggcaggctattgagcaggcttatctggaaaccctggctgttcgcagtgtggac
gtggagcccagtccggagacccatgctctggtggtggaagcgctggattccgtctgccgc
atgatggagcagttacctgcacgggtgcgcaaggtgtttgtgctggtgcaagtaaaaggg
ctggcgtatcagcaagtggcgcagacactggggatttcagtgcagtccgtgcaacgcgat
atggtcaaggcctggcagcattgctatgcggtgctatacacatga
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