Alcaligenes faecalis ZD02: UZ73_16755
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Entry
UZ73_16755 CDS
T04157
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afa
Alcaligenes faecalis ZD02
Pathway
afa03420
Nucleotide excision repair
afa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UZ73_16755
03430 Mismatch repair
UZ73_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afa03400
]
UZ73_16755
Enzymes [BR:
afa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UZ73_16755
DNA repair and recombination proteins [BR:
afa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UZ73_16755
MMR (mismatch excision repair)
Other MMR factors
UZ73_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALO39774
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All DBs
Position
3708385..3710679
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AA seq
764 aa
AA seq
DB search
MMDRLNPEQRAAVTLPSGHALVLAGAGSGKTSVLTSRMAWLIQTGQVSPHGLAAVTFTNK
AAREMLTRLTSLLPIDTRGMWVGTFHGLCNRLLRMHYRDAGLVQTFQILDTADQLASIKR
MVKANNVDDEKFPPKEIQKFINACKEDGQRPGDLEAHDPHRRRLIELYQLYQEQCEREGV
VDFGELLLRAYELLSRNAPIREHYQRRFKHILVDEFQDTNVLQYRWLRLLAGDQACMFAV
GDDDQSIYAFRGANVGNMADFERDYARGNVIRLEQNYRSCGHILDSANALIENNSGRLGK
NLWTDSGEGELVRISELASDALEAQWIVDEVRALIAEGKPRREIAILYRSNAQSRVIEHR
LFSQGLPYKVYGGHRFFERQEIKHVLAYLRLMDNADDDTAFLRVVNFPTRGIGARSVEQL
ADLARERGTSLLRAIPYLQGRAATSLMRFSNLIQDMASQAQILSLPELIEHVVHDSTLLA
HYQADREGAERLENLQELVNAATVFVGEEGFAELPAGRVPEAVAGESEQAMQNPDQATAS
VLAPMSPLGSFLTHASLEAGDNQAQAGQDAIQLMTIHAAKGLEFDAVFITGLEEGLFPHE
NSLFDPGGIEEERRLMYVAITRARQRLYITLAQSRMLHGQTRYAMRSRFLEELPEQHIKW
LSARYTSSPMQSEASSGAFRRGQSWESKDKSYSAQPYGGRSHTSALEVNGQTFRVGQGVH
HNRFGEGTIINLTGQGDDAQALIQFREVGSKTLALAIAKLDPVS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgcttaaacccggaacagcgagccgccgttactttaccctctggccatgcc
ctggtgctggccggagccggtagcggaaaaaccagtgtactgacctcccggatggcctgg
ttaatccagaccgggcaggtcagcccacatggccttgctgctgttaccttcaccaataaa
gccgcgcgcgaaatgctgacgcggcttacttctttattgcctatcgatacccgcggaatg
tgggtcgggacctttcacggcctgtgcaatcgcttgctgcgcatgcattaccgtgatgcc
ggtctggtacagactttccagatcctggatacggcagatcagttggcctccatcaaacgt
atggtcaaggccaacaatgtggacgacgaaaaatttccgcccaaggaaattcagaagttc
atcaatgcctgtaaagaagatggccaacgtcctggcgacctggaagcccacgatccccac
cgccgccgcctgatcgagctttatcagctttatcaagagcagtgcgaacgtgaaggtgta
gtggactttggtgagctattgctgcgtgcctacgagctgttgtcccgcaatgcccccatt
cgtgagcattatcagcgccgtttcaaacacattctggtcgacgagttccaggacaccaac
gtgctgcagtatcgctggttgcgtcttttggccggtgatcaggcttgcatgtttgcggtg
ggcgatgatgatcagtccatctatgccttccgtggcgcgaacgtgggcaatatggccgac
ttcgagcgcgactatgcccgtggcaatgtgatacgcctggagcagaactatcggtcctgc
ggccatattctggattcggccaacgcgctgatcgagaacaatagcggccgcctgggcaag
aatctgtggaccgatagtggcgaaggcgagctggtacgcatcagcgaactggcctcggat
gctcttgaagcacagtggatagtggatgaagtccgcgccctgatcgctgaaggcaagcca
cgtcgtgaaattgccattctgtaccgcagcaacgcccagtcccgagtgatcgagcatagg
ttgttttcccaaggcttgccctacaaagtgtatggcggccaccgcttcttcgagcgtcag
gaaatcaagcacgtactggcttacttgcgcctgatggacaacgcagatgatgacactgct
ttcctgcgcgtcgtgaacttcccgactcgcggtatcggtgcccgctctgtcgagcaactg
gctgatctggcgcgcgaacgcggtaccagcttgttgcgtgcaattccctatttgcaaggg
cgtgcggctaccagtttgatgcgtttctcgaacctgattcaggatatggccagccaggcg
cagatcctgtctttgcccgagctgattgagcacgttgtccacgacagcaccttgctggcc
cattaccaggccgaccgcgaaggtgccgagcgactggaaaacttgcaggaattggtcaac
gcagccacggtgtttgtgggtgaagaaggctttgccgagctgccagccggtcgagtccca
gaagctgtggcgggcgagtccgagcaggccatgcagaacccggaccaagcgactgcctcc
gtgctggctcccatgtcgcctttgggctccttcctgacccatgcttctttagaggccggg
gacaatcaggcccaggcaggccaggacgccattcagctgatgacgatccatgccgccaaa
ggtctggagtttgatgcggtcttcattaccggcttggaagagggtttgttcccgcatgag
aacagcttgttcgaccctggtgggatcgaggaagagcgtcgtttgatgtatgtggcgatt
acgcgggcgcgtcagcgcttgtatatcaccctggcgcaaagccgcatgctgcacggccag
acgcgttacgccatgcgttcacgctttttggaagagctgccggagcaacacatcaaatgg
ttgtcggcccgctataccagctcgcccatgcagtcagaggccagttcgggtgcattccgt
cgtggtcaaagctgggagtccaaggacaagagctattcggcacagccttacggcggtcgc
agtcacaccagcgcgctggaagtgaatggccagaccttccgtgtggggcagggggtgcat
cacaaccgctttggtgaaggcaccattattaatttgaccggtcagggcgacgatgcccag
gccttgattcagttccgtgaagtcggcagcaagactttggccctggccattgccaagctg
gatcctgtgagctga
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