Alcaligenes faecalis ZD02: UZ73_17665
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Entry
UZ73_17665 CDS
T04157
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
afa
Alcaligenes faecalis ZD02
Pathway
afa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UZ73_17665
09124 Replication and repair
03420 Nucleotide excision repair
UZ73_17665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afa03021
]
UZ73_17665
03036 Chromosome and associated proteins [BR:
afa03036
]
UZ73_17665
03400 DNA repair and recombination proteins [BR:
afa03400
]
UZ73_17665
Enzymes [BR:
afa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
UZ73_17665
Transcription machinery [BR:
afa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UZ73_17665
Chromosome and associated proteins [BR:
afa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
UZ73_17665
DNA repair and recombination proteins [BR:
afa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UZ73_17665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
ALO39932
LinkDB
All DBs
Position
3905001..3907286
Genome browser
AA seq
761 aa
AA seq
DB search
MKAWTVGVRALCEFTARSGDLDLRFTPAATAQEGILGHQQLKLRRPEHYEAEVPLSYEME
GLLVRGRADGFDPVSNCLEELKTYRGAFDAIPEHHRRLHQAQAKVYAAMLCQERDLPGMT
VSVVYYHVDKHKETSISEYLESADLWAFFEQQCRAYVAWGRQEQKHRLARDQACTALQFP
YEQFRAGQRQLAVAAFRAQRDAQCLLAQAPTGIGKTLAVVFPGLKAMPEAGLDKLFYLTA
KNSGRQMALDSLQRLSPDGEGAWRVLEMVARDKQCPNPDKACHGQSCPLAEGFYDRLPAA
RQQALEQPMLTSQRLQQVASEHQVCPYYLSQEMLRWADAIVGDYNYFFDTHAVLYSQTLV
QQWRSAVLVDEAHNLVERARSMYSASFSQVQLRMARKAAPSALKRHFAPLTRLMEDLIPE
EGGDQWGLEKIPEDLLEQCEYLAARLGAYVAENPMPQDNPLLQFYFELLYFVDLAGQFGS
HSLFDILAQRDGVLLNLRNIVPAPFLAERYGDAHGVVLFSGTMNPSQFYRDVLGLPPSTA
ELNVASPYRAEQLRVRQYAGLSTRYADRAQSLSGVCDIVGQAYQEQPGNYLLFLSSFDYL
EQVSQALQERWPDMPLWHQQPGMSDLQRTQFLDRFTLDGKGVGLAVLGGAFSEGVDLPGK
RLIGAFIATLGLPQFNPANESVRQVMARLFGERWAYDYTYLYPGLRKITQAAGRVIRDEQ
DQGFVYLLDERYGQRRVQQLLPDWWQIEQVRTDARSEQLPR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctggacggtcggcgtacgcgccttatgtgaatttaccgcccgtagtggggat
ctggacctgcgttttacacctgcggccacggcacaagaaggtattctgggccaccagcag
ttaaagctgcgccgccccgagcactatgaagctgaagtgccgctgtcatatgagatggaa
gggctcttggtgcgtggccgagccgatgggtttgatcctgtcagcaattgcctggaagag
ctgaaaacctatcggggtgcttttgatgctatccccgagcaccatagacgcctgcatcag
gcgcaagccaaagtctacgctgccatgttgtgccaggaacgcgatttgccggggatgaca
gtcagcgtggtgtattaccacgtggacaagcacaaagagaccagcatttcggagtatctg
gagagcgcggatctgtgggctttttttgagcagcaatgccgcgcttatgtcgcgtggggg
cggcaggagcaaaagcacaggcttgcacgcgatcaggcttgtacagccctgcagtttccc
tatgagcagtttcgtgcgggtcagcggcaactggctgtagctgcgttccgggctcagcgc
gatgcacagtgcctgttagcccaagcccccacgggtatcggcaaaaccttggcagttgta
tttcccggtctgaaagccatgccggaggcgggactggacaagctgttttatctgacggct
aaaaactcgggtcggcaaatggcgctggactccttgcagcgcttaagcccggacggtgag
ggcgcgtggcgggtgctggaaatggtggctcgcgacaagcagtgtcccaatccggataaa
gcctgccatggccaatcctgtcccctggccgaaggcttttacgaccggctgcctgcggcc
cgtcagcaagctctggaacaacccatgttgactagccagcgcctacaacaagtggctagt
gaacaccaggtctgcccctattacttgagccaggaaatgctgcgctgggcggacgccatt
gtgggcgactacaactattttttcgacacgcatgcggtgctgtatagccagactctggtc
cagcaatggcgcagcgctgttctggtggacgaagcacacaacttggtcgaacgcgcccgc
tccatgtattccgcatccttctcgcaagtgcagttgcgcatggcgcgtaaagccgcgcct
tcggccttgaagcgtcatttcgctcccttgactcgcttgatggaggacttgatacccgag
gaaggcggcgaccaatgggggctggagaaaatcccggaggacttgctggagcagtgcgaa
tatctggctgcccgtttaggggcctatgtggctgagaaccccatgccacaagacaacccc
ttgctgcagttttatttcgagctgctgtactttgtggacttggccggacagttcggttcg
cattccttgtttgatattttggcgcagcgcgatggtgtactcctgaacctgcgcaatatc
gtgcctgctccatttctggccgaacgctatggcgatgcgcacggtgtggtgctgttctcc
ggcaccatgaacccctcacagttttatcgtgatgtcttgggtttgccgccaagcacggct
gagttgaacgtggcatccccttatcgggccgagcaactacgggtacgccaatatgctggc
ctgtccacgcgctatgctgaccgggcccagagcctgagcggggtctgcgacattgtcggg
caggcctatcaggagcagccgggcaactatctcttgttcttgagcagctttgattatctg
gagcaggtcagccaggccttgcaggagcgctggccggatatgccgctttggcatcagcaa
ccgggcatgagcgatctgcaaagaacgcagtttctggatcgctttacgctggacgggaag
ggagtgggtttggcagtgctgggaggggcgttttcagaaggggtagatttacccggtaaa
cgcttgatcggtgcttttattgccaccttgggtttgccgcaattcaacccggccaatgag
tcggtgcggcaagtcatggcccggctctttggggagcggtgggcctatgactatacctat
ctgtatccgggactacgcaagattacacaggccgcgggtcgtgtgattcgcgatgaacag
gatcaaggctttgtgtatctgctggacgagcgctatgggcagcggcgggtgcagcagctg
ctgccggactggtggcaaattgagcaggtgcggactgacgctcgttctgagcaattacct
cggtaa
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