KEGG   Acidovorax facilis: ACN9MJ_00675
Entry
ACN9MJ_00675      CDS       T11333                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
afac  Acidovorax facilis
Brite
KEGG Orthology (KO) [BR:afac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afac03400]
    ACN9MJ_00675
Enzymes [BR:afac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACN9MJ_00675
    5.6.2.6  RNA 3'-5' helicase
     ACN9MJ_00675
DNA repair and recombination proteins [BR:afac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACN9MJ_00675
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: XRW22036
LinkDB
Position
complement(146829..149561)
AA seq 910 aa
MSTTRRPRKPLPPVAPSAAAAWMAVRGWQPFGFQQDVWRAIGEGRSGLLHATTGAGKTYA
VWLGALQHLARADAAPVPEEAPKVPNARTALRTRRAAAPPITVLWITPMRALAADSLRAL
QAPLPDLAPTWTSGLRTGDTASGERAAQDRRLPTLLVTTPESVSLLLARADAHERLASVR
LVVVDEWHELVGNKRGVQVQLALARLSGWNPALQVWGMSATLGNLDEALHTLLPQPLPSA
ADAPQPPPAVLVQGRIDKRLEVQVMLPARADRFAWAGHMGLSLLPQVVQSIEAAASTLVF
TNTRSQAERWYQALLEARPDWAGTIALHHGSLGHEVRDWVEQGLKAGQLKAVVCTSSLDL
GVDFLPVEQVLQIGSAKGVARLVQRAGRSGHAPGRSSSITLVPTHSLELVEAAAARHALA
QGRIEDRHTPRAPLDVLVQHLVTVALGGGFVPDALLAEVRRAPAYAALADNDWQWALQFV
RQGGASLATYPDFHRVVPDDEGIWRVPDARLARRHRSNIGTIVSDASMQVQFVSGGRLGS
VEESFIARLRKGDVFMFAGRLLELVRTQQMTAYVRIAPKGSAALPRWSGGRMPLSNTLAD
AMLEQLAQAERGKFTTPEMCCAQPLLELQQAWSALPTPSRLVAETLHTREGWHLYLYPLA
GRLVHLGLAGLLGWRASQQVPNTFSIAVNDYGLELLSAKPVDWPALLPRLIGEGTQTTIG
SGLEDEVLASLNATEMARRRFREIARIAGLIFQSHPGEQRSSRQLQASSSLYYDVFAQYD
PDNLLLAQARAELLANELDMERLARTLRGMQAQTLSIHALTRPTPFALPLMVERFRERLS
TETLADRLARMVQALEQAADATTGTHLAQHPVQSTDMAWDLPEGSATSARRTRRDPAGDS
PRRARRRHGF
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgagcacgacacgccgcccgcgcaagcccctgcccccggtggcaccgagtgccgcagcc
gcctggatggcggtgcgcgggtggcagccgttcggcttccagcaagacgtgtggcgcgcc
ataggcgagggccgctcgggcctgctgcatgccaccacgggcgcgggcaagacctatgcg
gtgtggctgggcgcgctgcagcatctggcgcgggccgatgctgcaccagtgcccgaagaa
gcccccaaagtccccaacgcccgcaccgccctgcgcacgcgccgcgctgcggcaccaccg
atcacggtgctctggatcacgcccatgcgcgcattggctgccgattcgctgcgcgccctg
caggcaccgctgcccgatctggcccccacctggaccagcggcctgcgcacgggcgacacg
gccagcggcgagcgcgctgcgcaagaccgccgcctgcccacgctgctggtgaccacgccc
gagagcgtctcgctgctgctggcccgcgccgatgcacatgagcgcctggccagcgtgcgc
ctggtggtggtggacgagtggcacgagctggtgggcaacaagcgcggcgtgcaggtgcag
ctggcgctggcgcgcctgtcgggctggaacccggcgctgcaggtgtggggcatgtcggcc
acgctgggcaacctggatgaggccctgcacaccttgctgccccagcccttgcccagcgcg
gcggacgcgccacagccaccgcccgccgtgctggtgcagggccgcatcgacaagcggctg
gaggtgcaggtgatgctgcccgcgcgtgccgaccgctttgcgtgggcgggccacatgggg
ctgagcctgctgccgcaggtggtgcagtcgatcgaagcggcagcgtccaccttggtgttc
accaacacccggtctcaggcggagcgctggtaccaggcgctgctggaggcgcggcccgac
tgggcgggcaccatcgcactgcaccacgggtcgctggggcacgaggtgcgcgactgggtg
gagcaaggcctgaaggccgggcagctcaaggccgtggtctgcacatcgagcctggacctg
ggcgtggactttctgccggtggagcaggtgctgcagatcggctcggccaaaggtgtggcg
cggctggtgcagcgtgcaggccgctcgggccatgcgccggggcgcagctccagcatcacg
ctggtgcccacgcacagcctggagctggtggaggccgccgccgcacgccacgcgctggcg
cagggccgcatcgaagaccggcacacgccgcgtgcgccgctcgacgtgctggtgcagcac
ctggtcaccgtggcgctgggcggcggctttgtgcccgatgcgctgctggccgaggtgcgc
cgcgcacccgcctacgctgccttggccgacaacgactggcagtgggcgctgcagttcgtg
cgccagggcggcgcatcgctggccacctacccggactttcaccgcgtggtgcccgacgac
gagggtatctggcgcgtgcccgatgcgcgcctggcgcgccgccaccgcagcaacatcggc
accatcgtgagcgacgccagcatgcaggtgcagtttgtgagcggcgggcgcctggggtcg
gtggaagagagcttcatcgcccggttgcgcaagggcgatgtgttcatgttcgcgggccgc
ctgctggagctggtgcgcactcagcagatgacggcctatgtgcgcatcgcccccaagggc
agcgctgcgctgccgcgctggagcggaggacgcatgccgctgtcgaacacgctggccgat
gcgatgctggaacagctggcgcaggcggagcgcggcaagttcaccacgcccgagatgtgc
tgcgcccagccactgctggagctgcagcaggcctggtcggccctgcccacacccagccgc
ctggtggccgagaccctgcacacgcgcgagggctggcacctgtacctgtacccactggcg
ggccgcctggtgcacctgggcctggccgggctgctgggctggcgcgcgtcgcagcaggtg
cccaacaccttctccatcgcggtcaatgactacgggctggagctgctgtcggccaagccc
gtggactggcccgcgctactgccgcgcctgatcggcgaaggcacgcagaccaccatcggt
agcgggctcgaagatgaagtgctggccagcctgaacgccaccgaaatggcgcgcaggcgc
tttcgcgagatcgcgcgcattgcgggcctgatcttccagagccaccccggcgagcagcgc
agcagccgccagctgcaggcctcgtcgtcgctctattacgacgtgtttgcccagtacgac
cccgacaacctgctgctggcccaggcccgtgccgagctgctggcgaacgagctggacatg
gagcgactggcccgcacgctgcgcggcatgcaggcgcagaccctgtccatccatgccctc
acgcgccccaccccgtttgccctgccgctgatggtggagcgctttcgcgagcgcctgagc
accgagaccctggccgacaggctggcgcgcatggtgcaggcgctggagcaggcggccgac
gccaccacgggcacccacctggcgcagcacccggtgcaatccacggacatggcgtgggac
ctccctgaaggctccgcgacctcggcacggcgcacgcgccgcgacccggccggggacagc
cctcgtcgcgcccgcagacgccacggattctga

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