Acidovorax facilis: ACN9MJ_16635
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Entry
ACN9MJ_16635 CDS
T11333
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
afac Acidovorax facilis
Pathway
afac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9MJ_16635 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afac03021
]
ACN9MJ_16635 (rho)
03019 Messenger RNA biogenesis [BR:
afac03019
]
ACN9MJ_16635 (rho)
Transcription machinery [BR:
afac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACN9MJ_16635 (rho)
Messenger RNA biogenesis [BR:
afac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN9MJ_16635 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
Spore_III_AA
S1CSD-TOTE-2
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
XRW20284
LinkDB
All DBs
Position
3619221..3620483
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEELEIENTGRMRKQELMFAIIKKRAKTGEQIIADGVLEILPD
GFGFLRSPDTSFTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALNKLDSVN
GGPPEQNKHKVMFENLTPLFPKEQMRLERDVKSEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTVMMQHIAHAITANNPDVHLMVLLVDERPEEVTEMQRTVKGEIIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDAAALQRPKRF
FGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLNRRLYEKRVFPAIEL
NKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKNMKATKTNVDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacttaaacgaactcaaggcactgcacgtgtctgaagtcctgaagcaagccgaagaa
ctcgaaatcgaaaataccggccgcatgcgcaagcaggagctgatgtttgcgatcatcaag
aagcgggccaagaccggagaacaaatcattgccgacggcgtgctggaaatcctgcccgac
ggtttcggcttcctgcgcagccccgacacgagctttaccgccagcacggacgatatctac
atcagtcccagccaggtgcgccgtttcaatctgcacaccggcgacatgatcgaaggtgaa
gtccgcacacccaaagatggtgaacggtactttgcgctgaacaagctggactccgtcaac
ggcggcccgccagagcagaacaagcacaaggtgatgttcgaaaacctgacgcccctgttc
cccaaggagcagatgcgccttgagcgcgacgtcaagagcgaagagaacatcaccggccgc
atcatcgacatcatcgcgcccatcggccgtggccagcgcgctctgatcgttgccccgccc
aagagcggcaagacggtgatgatgcagcacattgcccacgccatcacggccaacaacccc
gacgtgcacctgatggtgctgctggtggacgagcgccctgaagaagtgaccgaaatgcag
cgcacggtgaagggcgagatcattgcctccaccttcgacgagcccgccgcccgccacgtg
cacgtggccgaaatggtgattgagcgtgccaagcgtctggtcgagctgaagaaggacgtg
gtcatcctgctggactccatcacccgcctggcgcgcgcctacaacaacgtcgtgccctcc
agcggcaaggtgctttcgggcggtgtggacgccgccgcactgcagcgccccaagcgcttc
tttggcgctgcgcgcaaggtcgaagaaggtggctcgctcaccatcatcgccactgcgctg
gtggataccggcagccgcatggacgaagtgatctttgaagaattcaagggcacgggtaac
tgcgaaatccacctgaaccgccgcctctacgaaaagcgcgtgttccccgctatcgaactc
aacaagagcggcacccgccgcgaagagcttctgctggcgcccgagatcctgcaaaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgagtcgatggagttgatgatc
aagaacatgaaggccaccaagaccaatgtggacttctttgacatgatgcgaagaggaggg
tga
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