Acidovorax facilis: ACN9MJ_17080
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Entry
ACN9MJ_17080 CDS
T11333
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
afac Acidovorax facilis
Pathway
afac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACN9MJ_17080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afac03021
]
ACN9MJ_17080
Transcription machinery [BR:
afac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACN9MJ_17080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
Sigma70_r3
RovC_DNA-bd
Rv2175c_wHTH
FaeA
HTH_5
GerE
HetZ
Motif
Other DBs
NCBI-ProteinID:
XRW20369
LinkDB
All DBs
Position
complement(3722632..3723144)
Genome browser
AA seq
170 aa
AA seq
DB search
MSAAHPLHALYSHHHGWLQSWLRRRLGCADDAADLAQDTFVRLLARPAAIAPETMREPRA
YLTTVARGLLVDFWRRGELERAYLADLALQPEVLQPSPEERLAAVQMLQAVDALLQGLTP
KTRAAWLMSRLDGLKHAEIAEHLQVSVPRVRQYLANAMRHAYHLRFGGTA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctcatcccctgcacgcgctgtacagccaccaccacgggtggctgcaatcc
tggctgcgccggcggctgggttgtgccgacgatgccgcggacctggcgcaggacaccttt
gtgcgtctgctcgcgcgcccggccgccatcgcgcccgaaacgatgcgcgagccgcgtgct
tacctcaccaccgtggccaggggcctgctggtggacttctggcgccggggtgagctggaa
cgcgcctacctggcagacctggccctgcagcccgaggtgctgcagccatcccccgaagaa
cgcctggcggccgtgcagatgctgcaggcggttgacgcactgctgcagggcctgacgccc
aagacgcgcgcagcctggctcatgagccggctcgatggcctcaagcatgcagagattgcc
gagcacctgcaggtgtcggtgccgcgggtgcgccagtaccttgccaatgctatgcgccac
gcctaccacctgcgttttggtggcaccgcgtga
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