Acidovorax facilis: ACN9MJ_18160
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Entry
ACN9MJ_18160 CDS
T11333
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
afac Acidovorax facilis
Pathway
afac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9MJ_18160 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afac03019
]
ACN9MJ_18160 (pnp)
03016 Transfer RNA biogenesis [BR:
afac03016
]
ACN9MJ_18160 (pnp)
Enzymes [BR:
afac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACN9MJ_18160 (pnp)
Messenger RNA biogenesis [BR:
afac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN9MJ_18160 (pnp)
Transfer RNA biogenesis [BR:
afac03016
]
Prokaryotic type
tRNA degradation factors
ACN9MJ_18160 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
DUF5813
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XRW20570
LinkDB
All DBs
Position
complement(3961422..3963668)
Genome browser
AA seq
748 aa
AA seq
DB search
MSIFNKVTKTFQWGDKTVIMETGEIARQASGAVLVNIDDTVVLATVVASKGAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFFNEVHVVIHTV
SLNPEVDADIAALIATSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKNSQMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGNVAINAIHELVRDAGKPVWQWEAPAK
DETLIAKVVALADDKLRAAYQIRNKQARTQACREAYAAVMAALKAEGVEFDAVKVEGMLF
DIEAGIVRSQILAGEPRIDGRDTRTVRPIEIRGSVLPRAHGSSLFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMMHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALIAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDANRFAVL
TDILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSNFAPKLYTMKINPEKIRDVIGKGGAVIRALTEETGCQINIEEDGTITIA
ATDAAKADEAKKRIEQITAEVEIGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVGDYLTEGQIVKVKVMETDEKGRVKLSMKVLADRPAGGSDRPAPAERGDREPRRDHG
RDGGRQPADQQQQQQSLPSDSGSGQIVG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaagtcaccaagaccttccaatggggtgacaagaccgtcatcatg
gaaacgggtgagatcgcccgccaagcctccggcgctgtgctggtgaacattgatgacacc
gtggtgctggccaccgtggtggcatccaagggtgccaagccaggacaggacttcttcccc
ctgacggtggactacatcgagaagacctacgctgcaggcaagatccctggcagcttcttc
aagcgcgaagccaagcccagcgagcacgaaaccctgaccagccgcctgatcgatcgtccg
atccgcccgctgttccccgaaggtttcttcaacgaggtgcatgtggtgatccacacggtg
tctctgaaccctgaagtggatgctgacatcgctgctttgatcgctaccagcgcagcactg
gccatctctggtatcccgttcaacggccctatcggcgccgcacgcgtgggctacatcaat
ggcgaatatgtgctcaaccccggccagactgcgcgcaagaattcgcagatggatctggtg
gtggcgggtaccgaggccgccgtgctgatggtggaatccgaagcccagcaactgtccgaa
gaaatcatgctcggcgctgtggtgtttggccacgagcaaggcaatgtggccatcaacgcc
atccacgaactggtgcgtgatgctggcaagcccgtatggcagtgggaagctcctgccaag
gacgaaaccctgatcgccaaggtggtggccctggccgacgacaagctgcgcgctgcctac
cagatccgcaacaagcaagcccgcacgcaggcttgccgcgaagcttatgcggccgtgatg
gcggccttgaaggctgagggtgtcgagttcgacgccgtcaaggttgaaggcatgctgttc
gatatcgaagccggtatcgttcgcagccagatcctggcgggtgagccccgcattgatggc
cgcgacacgcgcaccgtgcgccctatcgaaatccgtggcagcgtactgccccgcgcccat
ggctcgtcgctcttcacgcgtggcgaaacccaggcgctggtggtgaccacgctgggcacc
gagcgcgacgctcagcgcattgatgcgctggctggcgagtatgaagaccgcttcatgatg
cactacaacatgcctccctttgccaccggcgaagtgggccgcatgggctcgaccaagcgc
cgcgaaatcggccatggtcgtctggccaaacgcgctctgattgccgtgttgccgacgaag
gaagaattcccctacaccatgcgtgtggtgtccgaaatcaccgaatccaacggctcgtcg
tcgatggcctcggtctgcggcggctgcctgtcgctgatggacgcgggcgttccgatgaag
gcgcatgtggcgggtatcgccatgggcctgatcaaggatgccaaccgttttgccgtgttg
accgacattctgggtgatgaagatcatctgggtgacatggacttcaaggtggcgggtacc
acggctggtattaccgcgctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggcccaggccaaggaagcgcgcatgcacatcctgggcaagatgcaa
gaggccatgggtgaagccaagaccgaggtgtcgaactttgcgcccaagctctacacgatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggtggcgcggtaatccgtgcg
ctgaccgaagaaaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgcc
gccactgacgcagcaaaggccgacgaggccaagaagcgcatcgagcagatcacagctgaa
gtcgaaattggcaagatctacgaaggccctgtgaccaagattctggacttcggcgcactg
atcaatctgctgcccggcaaggacggcctgctgcacatcagccagattgcccacgagcgc
gttgaacgcgtgggtgactacctgaccgaaggccagatcgtgaaggtcaaggtcatggaa
accgacgagaagggccgcgtcaagctgtcgatgaaggtgctggccgatcgtcctgccggc
ggcagcgaccgtcctgctcctgcagagcgcggcgaccgcgaaccacgtcgtgaccatggt
cgtgacgggggccgtcagcccgcggatcagcagcaacagcaacaatccttgccttcggac
agcggttccgggcagatcgtcggctga
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