KEGG   Acidovorax facilis: ACN9MJ_19025
Entry
ACN9MJ_19025      CDS       T11333                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
afac  Acidovorax facilis
Pathway
afac03030  DNA replication
afac03410  Base excision repair
afac03420  Nucleotide excision repair
afac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACN9MJ_19025 (polA)
   03410 Base excision repair
    ACN9MJ_19025 (polA)
   03420 Nucleotide excision repair
    ACN9MJ_19025 (polA)
   03440 Homologous recombination
    ACN9MJ_19025 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afac03032]
    ACN9MJ_19025 (polA)
   03400 DNA repair and recombination proteins [BR:afac03400]
    ACN9MJ_19025 (polA)
Enzymes [BR:afac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ACN9MJ_19025 (polA)
DNA replication proteins [BR:afac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ACN9MJ_19025 (polA)
DNA repair and recombination proteins [BR:afac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ACN9MJ_19025 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACN9MJ_19025 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap WHD_SSO1393
Other DBs
NCBI-ProteinID: XRW20737
LinkDB
Position
complement(4154882..4157680)
AA seq 932 aa
MTDKKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSPATGAIRGMINMMQALRKEVAADYA
VCVFDASGPTFRDAMYTEYKATRSPMPDDLRSQIEPIHQVVDLLGWKVVAVPGVEADDVI
ATLAHVAAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPALMVD
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALADYIPGLPAFDDITLDAPYNTGLLPFYEKYGFKGLASAIKGAAAP
AATAPTVAMPGQSGDLFADHSASTVAEEAQHRTVVYDTILNWADFDQWLARLHKAPLTAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLARLKTWLEDPKH
HKLGQHIKYDRHVFANHGIEVQGYSHDTMLQSYVLEVHKPHNLTSLAERHTGRKGITYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEMQSSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDETKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPDIKMIMQVHDELVFELPEGEVDWL
KTHIPRLMAEVAALKVPLLAEVGVGPNWDKAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgactgacaaaaagaccctggtgctggtggacggctccagctacctctaccgcgccttt
cacgccatgcccgacctgcgggccgtgccgggcgaccccaccagccctgccaccggtgcc
atccgcggcatgatcaacatgatgcaggcgctgcgcaaagaggtggcggctgactacgcc
gtgtgcgtgttcgacgcctcgggccccaccttccgcgatgccatgtacaccgaatacaag
gccacgcgctcgcccatgcccgacgacctgcgcagccagatcgaacccatccaccaggtg
gtggacctgctgggctggaaggtagtggccgtgcccggcgtggaggccgacgacgtgatc
gccaccttggcccacgtggcggccgcacagggcattgaggtcattgtgtccagcggcgac
aaagatttgagccaactggtcaacgagcacatcaccatcatcgacaccatgagcggcaag
cgccgagatgtggcgggcgtgacggccgagtttggcgtgccccccgcgctgatggtggac
taccaggccctggtgggcgacaccgtggacaacgtgcccggcgtgaccaaggtcggcccc
aaaaccgccgccaagtggttggaagaatatggctcgctcgacaacctgattgccaacgcc
gacgccatcaagggcgtggcaggcaacaacctgcgcgaggcgattgccagcggccaactg
gccttgagccgccagctcgtcaccatgaagaccgactgcgcgttggccgactacatcccc
ggcctgcctgcgtttgacgacatcacactcgacgcgccctacaacaccggcctgctgccg
ttttacgaaaagtacggcttcaaaggcctggccagcgccatcaaaggcgcagcggccccc
gccgccacagcccccaccgtcgccatgcccggccaaagcggcgacctgtttgccgaccac
tctgccagcaccgtggccgaagaagcccagcaccgcaccgtggtgtacgacaccatcctc
aactgggccgactttgatcagtggcttgcgcgcctgcacaaggccccgctcacggccatc
gacaccgagaccgactccctcgacgaaatgcgtgcgcaaatcgtcggcatctctttcagc
gtgcagcccggcgaagccgcctacatccccctgcgccacgaagggcccgatgcccccgcg
caactaccgctggatgaagtgcttgcccgcctcaagacctggctggaagaccccaagcac
cacaagctaggtcagcacatcaagtacgaccgccatgtgttcgccaaccacggcatcgaa
gtgcagggctactcgcacgacaccatgctgcaaagctacgtgctcgaagtgcacaagccc
cacaacctgaccagcctggccgagcgccacacggggcgcaaaggcatcacctacgaagac
ctgtgcggcaaaggcgcgcaccagatcccgtttgcgcaagtgcccgtggacaaggccgca
gcctactcgtgcgaagactccgaccagaccctggacgtgcacaacgccctgtggcccctg
ctgcaggccgacgacaaactgcgcttcatctacgagctggagatgcaaagcagcgaggcc
ctgtaccgcatcgaacgcaacggcgtgctcatcgacgcgcccacgctggccgcccaaagc
cacgaactgggccagcgcatcctgcagctcgaaaccgaggcctacgagattgcaggccag
cccttcaacctgagcagccccaagcagctgggcgaaatcttcttcgacaagctgggcatg
cccgtggtgaagaagaccgccaccggcgcccgcagcaccgacgaagaagtgctggaaaag
ctggccgaggactaccccctgcccgccaagctgctggagcaccgcagcctcgtcaagctc
aaaggcacctacaccgacaagctggcccagctggcgctgccacgcaccggccgcgtgcac
acgcactacgcgcaagccgtggctgtgaccggtcgcttgtcaagcaacgaccccaacctg
cagaacatccccatccgcacccccgaaggccgccgcgtgcgcgaagcctttgtggcccct
gcaggccgcgtgattgcgagtgccgactactcccagatcgagctgcgcatcatggcccac
ctgagcggcgatcactcgttgctgcacgccttccacgccgggctggacgtgcaccgcgcc
accgctgccgaagtgtttggggtggaggtcgatcaggtcaccagcgagcaacgccgctac
gccaaggtcatcaacttcggtctcatctacggcatgagcagctttggcctggccaagaac
ctaggcatcgagaccaaggccgccgctgcgtacatcgacaagtactttcagcgctacccc
ggcgtgaagcagtacatggacgaaaccaaggccgccgccaaatccatgggttatgtggaa
accgtgtttggccgtcgcctctacctgccagagatcaactcccccaatggcccccgccgc
gcaggggccgagcgcgccgccatcaacgcacccatgcagggcacagcggccgacctcatc
aagctggcgatggtggccgtgcagaaagaactggatgcccacaagccagacatcaagatg
atcatgcaggtgcacgacgaactggtgttcgagctgcccgagggcgaggtggactggctc
aagacccacatcccgcgcctgatggcggaagtggcggcgctgaaggtgccgttgctggcg
gaagtaggagtggggcctaactgggataaggcgcactga

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