Acidovorax facilis: ACN9MJ_20955
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Entry
ACN9MJ_20955 CDS
T11333
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
afac Acidovorax facilis
Brite
KEGG Orthology (KO) [BR:
afac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afac03016
]
ACN9MJ_20955
Enzymes [BR:
afac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACN9MJ_20955
Transfer RNA biogenesis [BR:
afac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ACN9MJ_20955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
WHD_RNase_II
SH3_VIII-1_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
XRW21096
LinkDB
All DBs
Position
4582750..4584825
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AA seq
691 aa
AA seq
DB search
MHALFEEAGKFMAGRILSEADTSAQIELDSGKRVKVKAANILLKFEKPAPADLIAQAQAV
AETIELDLAWEFAPEDEFGFADLARDYFSENATLAQQAGALFRLYDAPHYFRRAGKGRFK
KASAEILQQALAAIEKKKALLAQIDEWAAALGRGECPQPIRDQLYKILFKPDKNAPEYKA
VVDASRATHTAPLDLLQKAGAIDSSYQFHWKRFLFENFPKGTGFPPVTAPAIADELPLST
AQAYSIDDSQTTEIDDALSVQGLGTGTVVLGIHIAAPGLAIQPGSAIDQLGRARLSTVYM
PGYKITMLPDDVVQTYTLDEGRANPAVSLYVTIDEATLEFQSSETRLERVHIAANLRHDQ
LDAVVTEEWLSNPAFEHQNDPQRLSDLRPQLSFLHRLAKDLKARREVVRGKPENFNRPDY
NFRLVGNNGAEPTGDEQVQISVRQRGAPLDLIVAEAMIVANSTWGSWMAELGVPGIYRSQ
ASMAPGVKVRMGTKALPHAGIGVKAYSWATSPLRRYTDLVNQWQIIACARHGKTAALAAP
FKPKDADLFSIISSFDGAYGAYNGYQAGMERFWTLKYVEQNGITELNATVFKEGPGGSFL
VRADDIPLVFPVLGAQNLPRGARLKVKLGEVDEITLDIHGTVIERLDDPADTSDDGPVDD
AEDDDTVAGPIAIAVDVNEAPAEAAAAAPAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagaagccggcaagttcatggccggtcgtatcctgtccgaagcc
gatacatccgcccagatcgagctcgactcgggcaaacgggtcaaggtcaaggccgccaac
atcctgttgaagtttgaaaagcccgctcccgccgatctgatcgcccaggcccaggccgtg
gccgagaccatcgagctggacctggcctgggagttcgcgcccgaagacgaattcggcttt
gccgacctggcgcgggactatttctctgaaaacgccaccctggcccagcaggccggtgcg
ctgttccgcttgtacgacgcgccccactacttccgccgtgcgggcaagggccggttcaag
aaggcatcggccgaaatcctgcagcaggcgctggccgccatcgagaagaaaaaggccctc
ctcgcgcagatcgacgaatgggccgccgcgctgggacggggcgaatgcccccaacccatc
cgcgaccagctctacaagatcctgttcaagcccgacaagaacgcgcccgagtacaaggcc
gtggtggatgccagccgcgccacgcacaccgcgccgctcgacctgctgcaaaaggcgggc
gccatcgattcgagctaccagttccactggaagcgcttcttgttcgagaacttccccaag
ggcacgggctttccccccgtcaccgcacccgccattgcggacgagctgccgctgtccacc
gcgcaggcgtattccatcgacgattcgcagaccaccgaaatcgacgatgcgctgtcggtg
cagggcctgggcaccggcaccgtggtgctgggcatccacatcgccgcaccgggcctggcc
atccagccgggcagcgcgattgaccagctcggccgcgcacgcctgtccacggtgtacatg
ccgggctacaagatcaccatgctgcccgacgacgtggtgcagacctacacgctggacgaa
ggccgcgccaacccggccgtgtcgctgtacgtcaccatcgacgaagccacgctggagttc
caaagctccgagaccaggctggagcgcgtgcacatcgccgccaacctgcgccacgaccag
ctcgatgcagtggtgaccgaagaatggctgtccaacccagcgtttgagcatcaaaatgac
ccccagcgcttgtctgacttgcgcccacagctatcatttttgcaccgccttgccaaggac
ctcaaagcccgccgcgaagtggtgcgtggcaagcccgagaacttcaaccggccggactac
aacttccgcctggtcggcaacaacggtgccgagcccacgggcgatgaacaagtgcagatc
agcgtgcgccagcgcggcgcgccactcgatttgatcgtggccgaggccatgatcgtggcc
aacagcacctggggtagctggatggccgagctgggagtgcccggcatctaccgcagccag
gccagcatggcgccgggcgtgaaggtgcgcatgggcaccaaggcgctgccgcatgcgggc
atcggcgtcaaagcgtattcgtgggccacgtcgcccctgcgccgctacaccgatctggtc
aaccagtggcagatcattgcctgcgcccgccacggcaagaccgccgcgctggccgcgcct
ttcaagcccaaggatgccgacctgttctccatcatcagcagctttgacggcgcctacggc
gcctacaacggctaccaggcgggcatggaacggttctggacgctcaaatatgtagagcag
aacggcatcaccgagctcaacgccaccgtcttcaaggaaggcccgggcggcagcttcctc
gttcgcgcagacgacattccgctggtgttccccgtgctgggcgcgcaaaacctgccgcgc
ggcgcgcgcctgaaggtcaagctgggcgaggtggacgagatcaccctcgatatccatggc
accgtgatcgagcgcctggatgacccggccgacaccagcgacgacggcccggtggacgat
gccgaggacgacgataccgtggccggaccgattgccattgcagtggacgtgaacgaggca
cccgccgaagccgctgcggcagcaccggccgcctga
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