Alicyclobacillus fastidiosus: NZD89_00025
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Entry
NZD89_00025 CDS
T08690
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
afas
Alicyclobacillus fastidiosus
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afas03032
]
NZD89_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_00025 (gyrB)
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NZD89_00025 (gyrB)
DNA replication proteins [BR:
afas03032
]
Prokaryotic type
DNA Topoisomerases
NZD89_00025 (gyrB)
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NZD89_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
WAH41965
LinkDB
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Position
4169..6085
Genome browser
AA seq
638 aa
AA seq
DB search
MSDTHEEQVYDESQIEVLEGLQAVRKRPGMYIGSTSVKGLHHLVWEIVDNAVDEALAGRC
TRIIVQVHEDNSITVIDNGAGFPVGIHHKTGRPAVETALTVLHAGGKFGGAGYKVSGGLH
GVGASVVNALSTWLKVEVYRDGNVYVQEYERGVPQYDLKIIGTTDQHGTSVSFLPDPEIF
TETTVFQIEMLQHRLRELAFLNAGLAIVLEDEREGGKTQEFHYEGGVKEFVSYLNRSKDV
LHEDPVFVAGVKDDVTVEVALQYNDGYASTIYSFANNINTGEGGTHESGFKSALTRVIND
YGRKNNLIKGNESNLTGDDVREGIVSVISVKVPEPQFEGQTKTKLGNSEVRGIVESLFGD
KLQTFLDENPSVARKIIDKCVTASRAREAARKARELTRRKSALEVSSLPGKLTDCVTKDP
ERSEIYLVEGDSAGGSAKMGRDPQTQAILPLRGKIINVEKARLDKILSNEEIRAIITASG
TGIGDEFDLSKARYHKVVIMTDADHDGSHIRILLLTLFYRFMRPLIDAGYVYIAQPPLYK
VTKGKSIRYAYSDAELDRILGETGRQGIGLQRYKGLGEMNPEQLWETTMDPESRTLLRVT
MEDAMDADMIFSTLMGDKVEPRRDFIAEHARYVRNLDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagatacacatgaggaacaagtttatgacgaatcgcagatagaagtcctggagggt
ttgcaggctgttcgcaaacgtccaggtatgtacattggctcgacgagtgtaaagggtctc
caccatctcgtttgggaaattgtcgacaacgccgttgacgaggcgctcgctggtcgctgt
acgagaatcatcgtgcaggtccacgaggacaacagcattaccgtcatcgacaacggtgcg
ggcttccccgtcgggattcaccataagaccggccgtccggccgtggaaacggcgctgacc
gtcttgcacgcaggtggcaagttcggtggtgctggttacaaagtatctggtggactgcac
ggcgttggcgcatcggtcgtaaacgccttgtctacgtggttgaaagtcgaggtgtaccgc
gacggcaacgtgtacgtacaggaatacgaacgcggtgtgccgcagtacgacttaaagatc
atcggtacgaccgatcagcatgggacgagtgtttcgttcttgccagatcctgagatcttt
acggaaacgaccgtgttccagattgagatgctgcagcaccgtctgcgggaactcgcgttc
ctgaatgccggtttggccatcgtgctggaagacgagcgcgaaggcggcaagacgcaggag
tttcactatgaaggcggcgtgaaggagtttgtcagctacctcaaccggtccaaggacgta
ctccacgaagatccggtttttgtcgcaggcgtgaaagacgacgtgacggtcgaagtggcc
cttcagtacaacgacggctacgcgtcgaccatctactcgttcgcgaacaacatcaacact
ggtgaaggcggcacgcacgagtccggtttcaaaagtgcgctcacgcgcgtcatcaacgac
tacggccgcaagaacaacctcatcaaggggaatgaaagcaatctgacgggcgacgacgtc
cgcgagggcatcgtctcggtcattagcgtcaaggtacccgaaccacagttcgagggccag
accaaaaccaagctcggaaacagcgaagtgcgcggtatcgtggagagcctgttcggcgac
aagctacagacgttcctcgacgagaacccatctgtggcgcgcaagatcatcgacaagtgc
gtcacggcttcacgagcgcgcgaagctgcccgcaaggcacgcgaattgacccgccgcaag
agcgcgctcgaagtgagcagcttgccaggcaagttgactgactgtgtgacgaaggatcca
gagcgctccgagatttacctggtcgagggtgattccgcgggcggatcggcaaaaatgggc
cgcgatccacagactcaggccattcttccactgcgcggaaagatcatcaacgtagagaag
gcgcggctcgacaagattttgtccaacgaagagattcgcgccatcatcaccgcgtctgga
acgggcatcggcgacgaatttgacctgtcgaaagcgcgctaccacaaagtcgtcatcatg
acggatgccgatcacgacggaagtcacatccgcatcctgcttctcacgctgttttaccgg
tttatgcgcccgctcatcgacgccggttacgtctatatcgcgcaaccgcctctgtacaag
gtgacgaagggcaagagcattcgctatgcgtattcggacgcagaactggaccggatcttg
ggggagacgggccgtcagggtatcggcttacaacggtataaaggtctcggagagatgaat
ccggagcagttgtgggaaaccacgatggatccagaatctcgcacgttgctccgagtaacc
atggaagacgccatggacgctgacatgatcttcagcacactcatgggcgacaaggttgaa
ccgcgtcgcgatttcatcgcggaacacgcgcgctatgtccgcaacctggacatctaa
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